Pectobacterium atrosepticum JG10-08: EV46_06820
Help
Entry
EV46_06820 CDS
T03199
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
patr03400
]
EV46_06820
Enzymes [BR:
patr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EV46_06820
DNA repair and recombination proteins [BR:
patr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EV46_06820
Prokaryotic type
EV46_06820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIA70304
LinkDB
All DBs
Position
1514867..1516360
Genome browser
AA seq
497 aa
AA seq
DB search
MTTHVVTHHAVTHVVWLRNDLRITDNLALYAACQDPSATVLAVFIATPAQWEKHDMAPRQ
AAFLLENLTLVQHVLAEKGIPLHYHECADFAASVDWLMQFCAEQQATDLFYNHQYEINER
LRDKQVKDRLADSVVCHGYHDSLLLPPGSVLTGNGEMYKVFTPFRQAFIKRLLEADTTCV
PAPDARGEPINNTAELVPFSYPQCEVDSEDFPCGERAALQQLRRFCREQVQDYDQQRDFP
ALPGTSKLSPYLALGIVSPRQCFNRLRAECPDMLERREGGAFTWFNELVWREFYRHLIVS
WPQLCKHRPFTAWTQWVKWRESPEDLTAWQQGKTGYPIVDAAMHQLNETGWMHNRLRMIC
ASFLVKDLLIDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGER
FDPDGRFIRHWLPELAAVPDKDIHQPHRWADKQHVKLNYPLPIVDHKTARLDTLAAFEAA
KNIGMANNDREEKSKYA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatgtcgttacacatcatgccgttacacatgtagtctggctgcgcaacgac
ttgcgcattaccgataatctggcgctgtacgccgcctgtcaggatccgagtgcgactgtg
ctggcggtattcattgcgacgcccgcacagtgggaaaagcacgatatggcgccgcggcag
gctgcctttttgctagagaacctgacgttggtacagcatgtgctggccgagaaaggtatc
ccgctgcattaccacgaatgcgcggactttgcggcgtcggttgactggctgatgcaattt
tgtgcggagcagcaggccaccgatcttttctacaaccatcagtatgaaatcaacgagcgc
ctgcgtgataagcaggtgaaagatcggctggccgatagtgtggtttgtcacggttatcat
gacagcctgttgctgccgccgggtagcgtgctgacgggcaacggcgagatgtataaagta
ttcacaccatttcgccaggcttttatcaagcggctgttggaagcggatacgacgtgcgta
ccggcaccggatgcacgcggtgagccgatcaataacacggcggaattagtgccgtttagc
tatccgcagtgcgaagtggatagcgaggatttcccctgcggtgaacgtgcggcattgcag
cagttacgccgtttttgccgcgagcaggtgcaggattacgatcaacagcgggatttccct
gcgttgcccggtaccagcaagttgtctccgtatctggcacttggaattgtatcgccgcgc
caatgttttaaccgcctgcgtgctgaatgcccagatatgctggaacggcgtgagggcggc
gcatttacctggtttaacgagctagtctggcgcgaattttaccgtcacctgatcgtctct
tggccacaactgtgtaagcaccgaccgtttactgcgtggacgcagtgggtgaaatggcgg
gaatcaccggaggatttaaccgcctggcaacaggggaaaaccggctacccgatcgtggat
gcagcaatgcatcaactgaatgaaacagggtggatgcataatcgactgcgtatgatctgt
gccagttttctcgtcaaagatttactgatcgattggcgtgaaggtgagcgctactttatg
tcgcagttactggatggcgatttggcggcgaataatggcggctggcagtgggcggcgtcg
actggcaccgatgcggcaccttattttcgtatttttaatccgacaacgcagggcgagcgc
ttcgatcccgatggtcggtttattcgtcactggctacccgagctggccgcggtgccggat
aaagacattcatcagccccatcgttgggctgacaaacaacacgttaagctgaactatccg
ctgccaatcgttgaccacaaaaccgctcgtctggatacgctggcggcgtttgaagcagca
aaaaatatcggcatggcgaataacgatcgagaagagaaaagtaagtatgcgtaa
DBGET
integrated database retrieval system
