Pectobacterium atrosepticum JG10-08: EV46_10220
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Entry
EV46_10220 CDS
T03199
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00040
Pentose and glucuronate interconversions
patr01100
Metabolic pathways
patr01120
Microbial metabolism in diverse environments
patr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EV46_10220
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EV46_10220
Enzymes [BR:
patr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EV46_10220
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Paralog
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Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
AIA70952
LinkDB
All DBs
Position
complement(2347498..2349204)
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AA seq
568 aa
AA seq
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MKRFALSLLAGLVALQASAATPDRLTIVNQYVDNVLAKAGDHYHGQSPTPLLADGVDPRT
GKQMEWIFPDGRQAVLSNFSAQQNLMRVLVGLSNLSGNASYKQRAEAIVKYHFQHYQDES
GLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKDATARFIRGFWNAHV
YDWKIMETSRHGKYGQKMGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKE
DGALVWAKRLAQQYVLPRDKATGLGVYQFTQALKRDETTDDADTHSKYGDRAQRQFGPEF
GPTALEGNMMLKGRTSTIYSENALMQIQLGKDLGAEGKELLTWTTDGLKAFAKYAYNASD
NTFRPMLANGKDLSNYVLPRDGYYGKKGTVLKPYAADNSFLLSYARAYTVSPDAELWRVA
RGIAGAQGLGELGSAPGKDVKVDLATKNNDPYALFALLDLYQASKVKDYLSLAEKVGDNM
ISTRYKNGFFMAETNRQYADVDTIEPYALLALEAAVRNQPQSVAPFLNGAGFTEGGYRME
DGSTRVSTRDNELFLLNVGETLKPNNKK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttgcgctgtcgctccttgcgggtctggtcgctttacaggccagcgcggct
acaccggaccgtctcaccatcgtcaatcagtatgttgacaacgtgctggcgaaagccggt
gaccattatcacggtcaatcacctacaccactgcttgctgatggcgtcgatccgcgtact
ggcaaacagatggagtggatcttccctgatggtcgtcaggccgtattatccaacttctcc
gctcagcagaacctgatgcgcgtgctggttggactcagcaacctgagcggtaatgccagc
tataagcagcgtgccgaagcgattgtgaagtaccactttcagcattatcaagatgagagc
ggcctgctgatttggggcggtcatcgtttcgttgatttaaaaacgctgcaaccggaaggc
ccgagcgaaaaagagatggtgcatgagctgaaaaatgcttatccctactacgatttgatg
ttcagcgttgataaagacgcaaccgcacgctttattcgtggtttctggaatgcgcacgtt
tatgactggaagattatggaaaccagtcgccacggtaaatacgggcaaaaaatgggcgca
ctctggcaaagcccgttcgaacaacagccgcccttcttcgccaccaaaggcctcagcttc
ctgaatgcgggtaacgacctgatctattccgcatcgctgctctataaatacaataaggaa
gatggcgcgctggtctgggcaaaacgtttagcgcagcagtatgtactgccacgggataag
gctaccggtcttggcgtgtaccagtttacgcaggcgctgaaacgcgatgaaaccactgac
gatgcggatacacattccaaatacggcgatcgcgcccagcgtcagtttggcccagagttc
ggcccgaccgcgttggaaggcaatatgatgctgaaaggacgtaccagcacgatctattct
gaaaatgcgctcatgcagatccaactgggcaaagatttaggtgcggaaggtaaagagttg
ctgacgtggacaaccgacggcctgaaagcctttgctaaatatgcctacaacgcgtccgac
aacacgttccgcccgatgctcgctaacggcaaagatctttccaactacgttctgccgcgt
gacggttactacggtaaaaaaggcaccgtgctcaagccttatgctgcggataattcgttc
ctgctttcatatgctcgcgcctataccgtttcaccggatgccgaactgtggcgtgttgca
cgtggtatcgctggcgcacaggggctgggtgaattaggttcagcgccgggtaaagacgtc
aaagtcgatctcgccaccaagaacaacgatccttatgccctgttcgcgctgctggatctg
tatcaggctagcaaagtgaaagactatttgtcgctggcggaaaaagtgggcgataacatg
atcagcacacgttataaaaatggcttcttcatggccgagaccaacagacagtatgccgat
gtcgataccatcgagccttatgccctgctagcgctcgaagctgcggtacgcaatcagcca
cagtctgttgcaccgttcctgaatggtgcgggcttcactgaaggcggctaccggatggaa
gatggttcaacgcgcgtgtcgactcgcgataatgaactttttctgctgaacgttggtgaa
acactcaaacccaacaacaagaaataa
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