Pectobacterium atrosepticum JG10-08: EV46_11420
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Entry
EV46_11420 CDS
T03199
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00061
Fatty acid biosynthesis
patr00071
Fatty acid degradation
patr01100
Metabolic pathways
patr01212
Fatty acid metabolism
patr02024
Quorum sensing
patr04146
Peroxisome
Module
patr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EV46_11420
00071 Fatty acid degradation
EV46_11420
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EV46_11420
09145 Cellular community - prokaryotes
02024 Quorum sensing
EV46_11420
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
patr01004
]
EV46_11420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
patr04147
]
EV46_11420
Enzymes [BR:
patr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EV46_11420
Lipid biosynthesis proteins [BR:
patr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EV46_11420
Exosome [BR:
patr04147
]
Exosomal proteins
Exosomal proteins of breast milk
EV46_11420
Exosomal proteins of breast cancer cells
EV46_11420
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Pept_S41_N
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AIA71181
LinkDB
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Position
complement(2599096..2600781)
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AA seq
561 aa
AA seq
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MEKIWLSRYPADVPAEIDPDRYSSLIDMFENNVKRYADRPAFINMGEVMTFRKLEERSRA
FAAYLQNQLKLQKGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYTPRELEHQLKDS
GASTIVIVSNFAHTLEKVVHNTAVEHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL
PDAISFRRVLQEGRRQQYVRPDIINSDLAFLQYTGGTTGVAKGAMLTHRNMQANVAQCLA
AYGPVLKEGNEWVVTALPLYHIFALTANCLLFFELGGQNLLITNPRDIPAVVKELKQYPF
TAITGVNTLFNALLNNKEFHELDFSTLRLSVGGGASVQRAVAERWEKLTGKHLLEGYGLT
ESSPLVAVNPYDLKHYSGSIGLPVASTDVRIIDDNGNDVGPGESGELWVRGPQVMLGYWQ
QPAATDDVLKDGWLATGDIVTADDEGFLRVIDRKKDMILVSGFNVYPTEIEDVISRHPKV
SESAVIGVENEVSGEAVKAFVVRRDNSLTKEELITHCRRNLTGYKVPKEIEFCEDLPKSN
VGKILRRELRDDKKAKKDAAA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaatttggttatctcgctatccggcggacgtaccggcggaaattgacccggat
cgctattcgtcgttgattgacatgtttgaaaataacgtaaagcgttacgccgatcgacct
gcattcatcaacatgggtgaggtgatgacgtttcgcaagttggaagagcggagccgggcg
tttgcggcctatttgcaaaatcagcttaaattgcagaaaggcgatcgcgtggcgctgatg
atgcccaatctgctgcaataccctgttgcgctgtttggtgtgctgcgtgcgggtatggtg
gtcgtcaacgttaacccgctgtatacgccacgggaactggaacaccagctaaaagatagc
ggagccagcaccattgttattgtgtctaactttgcacatacgctggaaaaagtcgttcat
aacacggcggtggagcacgttatcttgacccgcatgggcgaccagctatccacggcaaaa
ggcactctggttaacttcgtcgtgaaatacattaagcgactggtgcccaaatatcatttg
cctgatgcaatctcgtttcgtcgcgtgttacaggaagggcgacgtcagcagtacgttcgg
cctgatatcatcaatagcgatctcgcctttctgcaatataccggcggcacgacgggcgtg
gcgaaaggcgccatgctcacgcaccgcaatatgcaggcgaatgtggcacagtgtcttgcg
gcttatggcccggtgttgaaggaagggaatgaatgggtggtaacggcgttgccgctgtac
catatttttgctttgacggctaactgtctgctgttctttgaactgggcgggcagaatctg
ttgatcaccaatcctcgagatattcctgcggtggtaaaagaactgaaacagtatcctttt
actgcgattacgggcgtcaatacgctgtttaatgcgttgttaaataataaagaattccat
gagcttgatttctcgacactgcgattatccgttggcggaggcgcgtcggtgcaacgggca
gtcgcggaacgttgggagaagctaacgggtaaacatctgcttgagggatacgggttaaca
gaaagctcccccttggtggccgtgaatccctacgatctcaaacattacagcggcagtatc
gggctgccagtggcctcaacggatgtcagaatcattgacgataacggcaacgacgttggg
ccgggcgaatccggtgaactgtgggtacgcggaccgcaggtgatgttagggtactggcag
cagcctgccgccacggatgacgtgttaaaagacggttggttggcgacaggtgacattgtc
acggctgatgatgaaggattcctgcgagtgatcgaccgtaagaaagatatgattctggtt
tccggttttaacgtctacccgacggagattgaagacgtgatcagccgtcatcccaaggta
tccgagtcggcggtgattggggtcgaaaatgaggtttccggtgaggcggtaaaagccttt
gtggtcaggcgtgataactcgttaacaaaagaggaactcattacgcactgtcgtcgtaat
cttacgggctataaagtgccgaaagagatcgaattctgtgaggatctgccaaaatccaac
gtcggaaaaattctgcgtcgtgaattacgtgacgataagaaggcaaagaaagacgctgct
gcctga
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