Pectobacterium atrosepticum JG10-08: EV46_11695
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Entry
EV46_11695 CDS
T03199
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00040
Pentose and glucuronate interconversions
patr01100
Metabolic pathways
patr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EV46_11695
Enzymes [BR:
patr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
EV46_11695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Tricorn_2nd
Motif
Other DBs
NCBI-ProteinID:
AIA71235
LinkDB
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Position
complement(2656372..2657538)
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AA seq
388 aa
AA seq
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MAKGNKIPLTFHTYQDAATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPW
NYYLLDLKEQNATQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLTTLEEKTIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRVDLVTGEA
ETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAEGESC
THEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDRQLRVMPPCSHLMSNYDGTLLVGD
GSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRIAQHNTSWEVLEGDRQVTHPHPSFTP
DNKQVLFTSDVDGKPALYLAKVPDSVWN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaataagatccccctaacgtttcatacctaccaggatgcagcaaccggc
accgaagttgtgcgtttaaccccgcccgatgttatctgccaccgcaactatttctaccag
aagtgtttcttcaatgacggtagcaagctgctgtttggcgctgcatttgatggcccatgg
aactactatctgctggatttaaaagagcagaacgccacacagttgacggaaggcaaaggc
gacaacacctttggtggtttcctgtctccgaacgacgatgcgctgtattacgttaaaaat
acccgtaatttgatgcgtgtcgatctgactacgctggaagagaaaacgatttatcaggtg
cctgacgattgggtcggctacggcacttgggttgccaactccgattgcaccaaaatggtc
ggtattgagatcaagaaagaagactggaagccactgaccgattggaaaaaattccaggag
ttctacttcactaatccttgctgtcgtctgattcgcgtcgatttggtaacgggcgaagcg
gagactattcttcaggaaaaccagtggctgggccacccaatctaccgtccgggtgatgac
aacacggttgctttctgtcacgaaggcccgcatgacctggttgatgctcgtatgtggttc
atcaacgaagatggcaccaacatgcgcaaagtgaaagagcatgcagaaggcgaaagctgc
acccacgaattttgggtgccggatggctccgcgatgatttatgtctcttatcttaaagac
gataccaaccgttatattcgcagcatcgatcccgttacgctggaagatcgccaactgcgt
gtaatgccgccgtgttctcacctgatgagtaactatgatggcacactgttggtcggtgat
ggttccgatgcaccggtcgacgtgcaggatgatggtggctacaaaattgagaacgatccg
ttcctgtatgttttcaacctgaaaactggcaaagaacatcgtattgcgcagcacaataca
tcctgggaagtgttggaaggggaccgtcaggtcactcacccgcacccgtctttcacgccg
gataataaacaagttctgtttacttctgacgtagatggaaaacctgcgttgtatctggcg
aaggttcctgattcagtctggaactaa
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