Pectobacterium atrosepticum JG10-08: EV46_13400
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Entry
EV46_13400 CDS
T03199
Name
(GenBank) 16S rRNA pseudouridylate synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
patr03009
]
EV46_13400
Enzymes [BR:
patr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
EV46_13400
Ribosome biogenesis [BR:
patr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EV46_13400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
JAKMIP_CC3
Herpes_ORF11
A2M
Motif
Other DBs
NCBI-ProteinID:
AIA71560
LinkDB
All DBs
Position
complement(3025662..3026357)
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AA seq
231 aa
AA seq
DB search
MRLDKFLSQQLEISRSLVARELHAQRVTVDGEVVKSGAFKLSPEHNVEFDGNPLKQQNGP
RYFMLNKPQGYVCSTDDPDHPTILYFMDVPVAYKLHAAGRLDIDTTGLVLLTDDGQWSHR
ITSPKHECEKTYLVTLELPLAEDTAEQFTVGVQLHNEKNLTKPATLEKITDHVVRLTISE
GRYHQVKRMFAAVGNRVVELHRERIGGICLDSELEPGEFRELSAEEVASVK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggacaaatttttatcccaacagctggaaattagtcgttcactggtggcgcgc
gagctccacgcacagcgtgttaccgtagatggcgaagtggtaaaaagcggtgcgttcaag
ttatcccctgagcataacgttgaatttgatggtaacccgttgaaacagcaaaacggccca
cgttatttcatgttgaataagcctcagggctacgtttgttcaactgacgatcccgatcat
ccgaccattctttattttatggatgtgccggtggcgtacaaactgcatgccgcagggcgt
ttggatatcgataccacagggctggtgctgttaactgacgatgggcaatggtcgcatcgt
attacctcacctaaacatgagtgtgaaaaaacctatctggtgacgctggagttgccgctg
gctgaggataccgcagagcaatttacggtgggtgtacagctgcataacgagaagaatctt
actaaacccgctacgcttgagaagataacggatcatgttgttcggttgacgattagcgaa
ggtcgctatcatcaggtgaaaaggatgtttgctgcggtgggcaatcgcgttgtggagcta
caccgtgagcggatcggtggtatctgtttggatagcgagctggaaccgggagaattccgc
gagttaagtgctgaagaggtcgccagcgtaaaataa
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