Pectobacterium atrosepticum JG10-08: EV46_16465
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Entry
EV46_16465 CDS
T03199
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
patr03016
]
EV46_16465
Enzymes [BR:
patr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EV46_16465
Transfer RNA biogenesis [BR:
patr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EV46_16465
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AIA72136
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All DBs
Position
3696183..3696713
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AA seq
176 aa
AA seq
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MSATRRLFFALSLPETTQQEIIRWRAEHFPLEAGRPVAAANLHLTLAFLGDVSEQKAQVL
QTLASRIRQPAFTLTLNDAGHWPRPGVVWLGCRRAPRGLLQLAELLRSQAARNGCYQTAL
PFHPHITLLRGATRPVAIPPATFSWQADMTHFSLYQSLFDNGKTRYQKLESWSFIK
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccacccgccgcctgttttttgccttatcactgccggaaaccacacagcaagag
attatccgctggcgtgccgaacatttcccactggaagcaggccgtccagtggctgcggcc
aaccttcatctgacgctggcttttttaggcgatgtgagtgagcaaaaggcgcaagtctta
cagaccttagcaagccgcattcgtcagcccgcgtttaccctcacgctgaatgacgcagga
cactggccgcggcccggtgttgtctggctgggctgccgccgtgcaccgcgtggattgcta
cagctcgcggaactattgcgctctcaggcggcgcgcaacggctgctatcaaacagcatta
ccttttcacccacatattacgttattgcgcggcgcgactcgtcccgtggcgattcccccc
gctacgttcagttggcaggccgacatgacacacttttccctttatcagtcacttttcgac
aacggtaaaacccgctatcaaaagctggaaagttggtcatttattaaatag
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