Pectobacterium atrosepticum JG10-08: EV46_17525
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Entry
EV46_17525 CDS
T03199
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
patr03016
]
EV46_17525 (truD)
Enzymes [BR:
patr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EV46_17525 (truD)
Transfer RNA biogenesis [BR:
patr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EV46_17525 (truD)
Prokaryotic type
EV46_17525 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIA72321
LinkDB
All DBs
Position
complement(3914082..3915128)
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AA seq
348 aa
AA seq
DB search
MENSEQLVWLHGEPQATGSLKSTAEDFLVVEDLGFQPDGDGEQVLVRVRKRGCNTQFVSE
MLAKFARLPLRAVSYAGLKDRHAVTEQWFCLHMPGKETPDFSSLELEGCDVLEVIRHRRK
LRIGTLRGNHFALVLRQVSDRNEVDARLAQIAASGVPNYFGSQRFGRNGNNLEQARLWAN
NDIRVKERSKRSFYLSASRSAMFNQVASARLAGQQAKTVLCGDALQLTGRGSWFVAKADE
LETLQVRLDAGELQITAPLPGDDELGTQDDALAFEEQALTGQETLWSLVKRERVEPARRA
VLLYPQQMQWEWQDDVTVAVKFWLPAGSFATSVVREVLHSQQDIDIGA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagcgaacaactcgtctggctgcacggtgaaccacaggctactggctcatta
aaatccactgcggaagactttctggtggtggaagatctggggtttcaaccagatggtgat
ggtgagcaggtcttggtacgcgtacgtaagcgcggctgcaatacgcaatttgtgtccgag
atgctggcgaaatttgctcgtctaccgctacgtgccgtcagctacgcaggcctgaaagat
cgccatgccgtcacagaacagtggttttgcctgcacatgccgggaaaagagacgccagat
ttctcctcgctggaactggagggttgtgacgtgcttgaggttatccgccaccgtcgcaag
ctgcggatcggtacgctgcggggtaaccattttgctctggtgttacgtcaggtgagtgac
cggaacgaggtcgacgcccgtttagcgcagatcgctgcgagcggtgttcctaattatttc
ggtagccagcgtttcggacgaaacggaaataatcttgagcaggctcgcctttgggccaat
aacgatattcgggtaaaagaacgcagtaagcgtagcttttatctttctgctagccgcagt
gcgatgtttaatcaggttgccagcgcacgactggcgggacagcaagcgaaaaccgttttg
tgtggtgatgcattgcagctgacaggacgcggcagttggtttgttgctaaagcggatgaa
ctggaaaccttgcaggtgcgccttgacgctggcgagctccagattaccgcgccgctgccc
ggagatgatgaactgggcacgcaggatgacgcacttgcatttgaagaacaggcgttgacc
gggcaagaaacgctgtggtctttggtcaagcgtgagcgggtcgaacctgcccggcgtgct
gtgctgctatatccgcagcagatgcaatgggaatggcaggatgacgtgacggtggcagtg
aagttctggctacctgctggcagttttgcaaccagcgtggtgcgtgaagtgctgcattca
cagcaggatatcgatatcggcgcctga
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