Pectobacterium atrosepticum JG10-08: EV46_19020
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Entry
EV46_19020 CDS
T03199
Symbol
nhaR
Name
(GenBank) transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
patr
Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
patr03000
]
EV46_19020 (nhaR)
Transcription factors [BR:
patr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EV46_19020 (nhaR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
RhopH3_C
Motif
Other DBs
NCBI-ProteinID:
AIA72614
LinkDB
All DBs
Position
complement(4255219..4256139)
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AA seq
306 aa
AA seq
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MSHLNFNHLYYFWQVYKSGSVAGAAEMLFLTPQTITGQIKCLEERLQGKLFKRKGRGLEP
TELGQLVFRYADSMFQLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSRVLETVVTEQE
HIHLRCFESTHEMLLEQLSQHKLDMILSDCPVDSTQQEGLFSLKLGECAVSFYCKRPQPE
LPFPACLEQRKLLIPGRRTMLGRKLLNWFTAQNIQTNILGEFDDAALMTAFGINNDAIFV
APSLYANEIYQQGDIVEIGRIENIQDEYYAIFAARMIQHPAVQRVCNADFSALFCDRAEG
LSRGDG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcatttgaattttaatcatctctattatttctggcaggtttataagtcgggctcc
gttgccggtgcggcagaaatgctgtttttaacgccgcagaccattactgggcaaatcaaa
tgtctggaagagcgtttacagggcaaacttttcaagcgcaaagggcgagggttggagccg
acggaactggggcaacttgtttttcgctatgcggatagcatgttccagctcagccaggaa
atgttagatattgtgaactaccgcaaagaatcgaacctgttattcgatgttggcgtggca
gatgcgttgtccaaacggttggtgagccgagtgctagaaacggttgtgacggaacaggaa
catatccatttgcgctgttttgagtcgacgcacgaaatgctgctggagcagttgagccag
cataagctggatatgatcctatcagattgcccagttgattcaactcagcaggaagggttg
ttttcactcaagttgggcgagtgtgctgtgagcttttactgtaagcgtccgcagcctgag
ctgccttttccagcctgccttgaacaacgtaagctactgattcccgggcggcgaaccatg
ctgggacgaaagctattgaattggtttacggcgcagaatattcagacgaacattttgggt
gaatttgatgatgcggcgctgatgacggcatttggcattaataacgatgcgattttcgtt
gcgccgtcgctgtatgccaatgaaatttatcagcagggtgatatcgtcgagatcggcagg
atcgagaacattcaggacgagtattatgcgatttttgcggccagaatgatccagcaccct
gcggtgcagcgtgtctgtaacgcggatttctccgcgctcttctgtgatagagcagaaggt
ctgtcgcggggtgatggataa
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