Pectobacterium atrosepticum JG10-08: EV46_20130
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Entry
EV46_20130 CDS
T03199
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00260
Glycine, serine and threonine metabolism
patr00460
Cyanoamino acid metabolism
patr00630
Glyoxylate and dicarboxylate metabolism
patr00670
One carbon pool by folate
patr00680
Methane metabolism
patr01100
Metabolic pathways
patr01110
Biosynthesis of secondary metabolites
patr01120
Microbial metabolism in diverse environments
patr01200
Carbon metabolism
patr01230
Biosynthesis of amino acids
patr01240
Biosynthesis of cofactors
patr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EV46_20130 (glyA)
09102 Energy metabolism
00680 Methane metabolism
EV46_20130 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EV46_20130 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EV46_20130 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EV46_20130 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EV46_20130 (glyA)
Enzymes [BR:
patr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EV46_20130 (glyA)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
AIA72821
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Position
complement(4464045..4465316)
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AA seq
423 aa
AA seq
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MYDTSLTLTDFDPELADAILHEEDRQETHVELIASENYASPLVMAIQNSVFTNKYAEGYP
GKRYYSGCEYVDVAERLAIERAKVLFDCDYANVQPHAGAQANAAVFLALTNPGDTVMGMN
LAQGGHLTHGNPSNFSGRHYKIVPYGLDSKTGLIDYDEMERIALENRPKMLIGGFSAYSR
HKDWARMRTIADKVGAIFWVDMAHVAGLVAAGEYPNPLPHAHVVTSTTHKTLRGPRGGII
LAKGQSEDFYKKLNAAVFPGIQGGPLMHVIAAKAVAFKEALRPEFTVYQRQVVANARTMA
RIIQQRGYKIVSDGTDNHLLLIDLSAKPYTGKDADAALSDAYITANKNSVPNDPRSPFVT
SGLRIGTPAVTTRGFGVTECEQLAGWLCDVLDGLGAGNEELTVIRDRVREQVVALCHRYP
VYQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacacctctttgactcttaccgacttcgaccccgaattagccgatgccatcctg
catgaagaagaccgtcaggaaacccacgttgaactcatcgcttcagagaattatgccagt
ccgctggtgatggcgatccagaattctgtgttcaccaacaaatatgcagaaggttacccc
ggcaagcgctattacagcggctgcgagtatgttgacgtagccgaacgccttgctatcgag
cgagccaaagtgctgtttgactgcgattacgctaacgtccagccccatgccggtgctcag
gcgaatgcggccgtgtttctggcattgactaacccaggcgacaccgtgatgggtatgaat
ttggctcagggcgggcatttgacccacggtaacccttccaacttctctggtcgccactac
aagatcgtgccttatgggcttgattctaaaacagggcttatcgattacgacgaaatggaa
cgtattgccttggaaaaccggccaaaaatgttaataggaggattttccgcctattcacgc
cataaggactgggcgcgtatgcgcactattgctgacaaagtgggagctatcttctgggtg
gatatggctcatgttgctggtttagtggcggcgggtgaatacccgaacccgctccctcac
gctcatgttgtgaccagtacaacgcataagaccctgcgcggcccgcgcggtggcattatt
ttggccaaggggcagagtgaggatttttacaaaaagctcaacgccgccgtgttccccggt
attcaaggcggcccgctgatgcacgttattgcggccaaagcggtggccttcaaggaagcg
ctacgccctgagttcacggtttatcagcgtcaggtggtggccaatgctcgaacaatggcg
cgtattatccagcagcgtggttacaagatcgtctccgacggcactgacaaccatttgctg
ctgatcgacctgtccgccaagccgtataccggcaaggatgccgacgccgcgctgagtgat
gcttatatcacggcaaataagaactcagtgcctaacgacccgcgttcaccttttgttacc
tcaggcctgcgtattggtacaccagccgtgacgacacgtggtttcggtgtgacagagtgc
gagcaactggcggggtggctatgtgatgtgctggatgggctgggtgccgggaatgaagaa
ttaacggtgatacgcgatcgtgttcgcgagcaggtagtagcactgtgccaccgttatcct
gtgtatcaataa
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