Pectobacterium atrosepticum JG10-08: EV46_20240
Help
Entry
EV46_20240 CDS
T03199
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00040
Pentose and glucuronate interconversions
patr01100
Metabolic pathways
patr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EV46_20240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EV46_20240
Enzymes [BR:
patr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EV46_20240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF834
Motif
Other DBs
NCBI-ProteinID:
AIA72843
LinkDB
All DBs
Position
4485606..4486730
Genome browser
AA seq
374 aa
AA seq
DB search
MKYLLPTAATGLLLLAAQPAVAANTGGYATTDGGETSGAVKKTARSLQEIVDIIEAAKVD
SKGKKVKGGAYPLIITYNGNEDSLIKAAEKNICGQWSKDARGVQIKEFTKGITILGTNGS
SANFGVWIVNSSDVVVRNMRFGYMPGGAQDGDAIRVDNSPNVWIDHNEIFAKNFECKGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGASNTDTGRNLTYHHNIYRDVNSRL
PLQRGGLVHAYNNLYDGITGSGFNVRQKGIALIESNWFENALNPVTARNDSSNFGTWELR
NNNVTKPADFSKYNITWGRPSTPHVNADDWKNTGKFPSISYKYSPVSAQCVKDKLANYAG
VSKNLAVLTAANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctattgcctacggcagccactggattgttattactcgcggctcagccagcg
gtggcagcaaatacgggcggctatgccaccacagatggtggagaaacttccggcgccgtg
aaaaaaaccgcacgttctttgcaagaaattgtggatattattgaagctgcgaaagtggat
tcaaaaggcaagaaagtcaaaggcggtgcttacccgctcatcatcacctataacggtaat
gaagattcattaatcaaagcagctgaaaagaatatttgcggccagtggagtaaggatgct
cgcggcgtacaaatcaaagagttcaccaaagggattaccatcctcggtaccaatggttca
tcggccaacttcggtgtctggatcgtgaactcctctgacgtcgtcgtacgtaatatgcgc
ttcggctatatgccgggcggtgcgcaagacggtgacgccattcgtgttgataactctcca
aacgtctggattgaccacaatgagatctttgccaagaactttgagtgtaaaggcacgcca
gacaatgacacgacttttgaatcggccgtcgatatcaagaaaggctcaactaacgtcacg
gtatcctacaactacattcatggcatcaagaaagtcggcctaagcggcgcaagcaatacg
gatacaggacgcaatctgacttaccatcacaatatctatcgcgatgttaactcacgtctg
ccgctacagcgtggtggtctggttcatgcttacaacaacctgtatgacggtatcactggc
tccggctttaacgtccgtcagaaagggatagcgttgatcgaaagcaactggttcgaaaat
gcgctcaacccggtgactgcacgtaacgacagctccaacttcggtacctgggagttgcgt
aacaacaacgtcacaaaaccggcagacttctccaaatacaacatcacctggggtcgtcct
tccacgcctcacgtcaatgctgatgattggaaaaacaccggcaagttcccttccatttct
tacaaatactccccagtttcggcacagtgtgtgaaagataagctggcgaactacgcgggt
gtaagtaaaaacctagcggtactgacagcagctaactgcaaataa
DBGET
integrated database retrieval system
