KEGG   Pectobacterium atrosepticum JG10-08: EV46_20375
Entry
EV46_20375        CDS       T03199                                 
Symbol
hofQ
Name
(GenBank) porin
  KO
K02507  protein transport protein HofQ
Organism
patr  Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:patr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:patr02044]
    EV46_20375 (hofQ)
Secretion system [BR:patr02044]
 Type II secretion system
  Type IVa pilus homolog protein
   EV46_20375 (hofQ)
SSDB
Motif
Pfam: Secretin Secretin_N STN type_II_gspD_N0
Other DBs
NCBI-ProteinID: AIA72869
LinkDB
Position
complement(4514484..4515773)
AA seq 429 aa
MTRKVMNIRMLCRVVAWSWLLLLSVPYQASAESSVSMAFEDSPISRVLQALADHQQLNVV
IAPGVTGNLSLRLADIPWQQALDIVLRMGKLSVERNGNVLLVFPADHLESLQKERDERIA
EQAQKLPLHNLSVALQYADATEVAASVQAQRGTLLSTRGSVTVDKRTNTLLIRDTEEALS
QLEPWAKELDLPLAQVQLAAHIVTISSEHLQALGVNWGLGEGDAANKALRLNNFNVGLPV
DTPAINAGFHLARLNGRLLDLELMALEQESEVEIIASPRLFTAHQQTASIKQGTEIPYQV
SSGASGSTSIEFKEAVLGMEVTPDILRAGRITLNLKISQNMPGQTIKQGDNGEALAIDKQ
EIQTQVTVADGETIVLGGIFQQQKKNSDRQVPILSEIPVFGHLFRNHTQQHTRRELVIFI
TPTLIPASL
NT seq 1290 nt   +upstreamnt  +downstreamnt
ataacaaggaaggttatgaatataaggatgttatgccgggtggtggcgtggagctggttg
ctgcttctcagtgtgccgtatcaggccagtgcggagagttcggtatcgatggcatttgag
gactcaccaatatctcgcgtgttacaggccttagccgatcaccagcagctcaatgtggtg
atcgcaccgggtgtgacagggaatctaagcctgagactggcagatattccctggcagcaa
gcgctggatattgttttacgtatggggaaacttagcgtagagcgcaacggtaacgtgctg
ctggttttccctgctgatcatcttgagtctttgcagaaggaacgggatgagcgcatagcg
gagcaggcgcagaaattgccgctgcataatctttctgttgccttacagtacgctgatgcc
acggaggttgcagccagcgttcaggcgcaacgtgggacgctgctttctacgcgtggcagc
gtaaccgtggataaacggacgaataccttattgattcgcgatacggaagaggctctgtca
cagcttgaaccgtgggcgaaagagctcgatctgccgttagcgcaggtacagctggcggcg
catattgtcaccatcagcagtgagcacctgcaggcattgggtgttaactgggggttgggc
gagggggacgcggcgaacaaagcgctcaggctgaataattttaatgttggcttgccggtg
gatacgccagcgatcaatgccgggttccatctggcgcggctgaacggtcgcttactggat
ctggaattaatggcgctggagcaggaaagtgaggtcgaaattatcgccagtcctcgactt
tttaccgcacatcagcaaaccgccagcattaaacaagggacggaaattccgtatcaggtc
tccagcggtgccagcgggtcgacgtctatcgaattcaaagaggcggtattaggcatggaa
gtcacgcctgatattctgcgtgctgggcgtattacgctgaacctgaaaattagtcaaaac
atgccggggcagacgattaagcaaggtgataatggcgaagcgttagcgatcgataaacag
gaaatccaaactcaggtgacggtcgctgatggagaaaccatcgtattaggcggcattttc
cagcaacaaaaaaagaatagcgacagacaggtgccaatattgagtgagattcccgtattt
ggtcatctgttcagaaaccatactcagcagcacacgcgacgagaattggtcattttcatt
acaccgacgctgatccctgcatcattatga

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