Pectobacterium atrosepticum JG10-08: EV46_21275
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Entry
EV46_21275 CDS
T03199
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EV46_21275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
patr03400
]
EV46_21275
Enzymes [BR:
patr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EV46_21275
DNA repair and recombination proteins [BR:
patr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EV46_21275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
AAA_19
AAA_22
Zn_ribbon_6
ArfA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AIA73034
LinkDB
All DBs
Position
4722149..4724347
Genome browser
AA seq
732 aa
AA seq
DB search
MSVAQVALPVPLARTFDYLLPVGGVTPQVGTRVSVSFGNRKAIGIITALSDTSALPLEQL
KPVHDVLDEQPLFPPSLWRILLWAVEYYHYPIGEVLFHALPILLRQGKPAHRAPLWQWFA
TEQGRATPLSTLKRAAKQQQALAALLQSPLYRHQVGEIGLTETALQALRSKGLCELKAAE
QTPHDWRQSFSMATDRLRLNTEQATAVGAIRSEDNHFAAWLLAGITGSGKTEVYLSVLEN
VLAQGKQALVLVPEIGLTPQTIARFRERFNVPVDVLHSALNDSERLAVWLRARSGEAAIV
IGTRSALFTPFARLGLIVIDEEHDSSYKQQEGWRYHARDLAVFRAREEDIPIVMGTATPA
LETLYNVQVGKYRRLNLTKRAGNAALAKQHVIDLKSLPLTAGLSQPLITRIRHHLTNDNQ
VILFLNRRGFAPVVMCHECGWIAECQRCDHYYTYHQHQKMLRCHHCDSQRPVPQQCPGCG
STNMVPVGLGTEQLEQSLAPIFPDVPITRIDRDTTSRKGALEQQLSQVRLGGARLLIGTQ
MLAKGHHFPDVTLVALLDVDGSLFSADFRAAERFAQLYTQVAGRAGRAGKAGEVALQTHH
PEHPLLQTLLRQGYDAFASQALTERKSVFLPPFTSHIIFRADDHDNQQAALFLQQLRNLL
EASPLRDESLWLLGPVPALQPKRAGRFRWQLLLQHPSRALLQKLVRTSLALIGTLPQARK
VKWMLDVDPTDG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctcaggtcgctttgcccgtgccactggcgcgtacattcgattatttgcta
ccagtaggaggagtgactccgcaggtcggcacacgcgtcagcgtctcttttggtaaccgc
aaagccatcggcattattaccgcactgagcgacaccagcgcacttccgcttgaacaatta
aaacccgtgcatgacgtgctggacgaacagccgctgtttccacccagtctgtggcgcatt
ttactgtgggcagtcgagtactatcactacccaattggcgaagtgctgttccatgcgttg
ccgatattactgcgtcaggggaaacccgcgcaccgcgcgccgctctggcagtggtttgcc
accgaacaaggccgggcgacaccgctcagcacgctaaaacgcgccgctaaacagcagcag
gcgctggcggccttacttcagtcgccactttatcgccatcaggtgggcgaaatcgggctg
acggagacggcgttacaggcgctacgcagcaaaggattgtgcgagttaaaagcagcagag
caaacgcctcatgactggcgtcaaagctttagcatggccactgaccgcctgcgcctgaac
actgagcaggccaccgccgtcggtgctatccgcagcgaagacaaccactttgccgcctgg
ctgctcgcgggtatcactggctcaggtaaaactgaagtctatctcagcgtgttggaaaac
gtgctggcacagggcaaacaggcgctggtattagtgccagaaattggcctgacgccgcaa
accattgcccgcttccgcgaacgttttaacgtgccggttgatgtactgcactcggcactc
aacgacagcgaacgcctcgccgtttggctacgcgcccgcagcggagaagccgcgatcgtc
atcgggacacggtcggcattatttaccccctttgcgcgtttggggctgattgtgatcgat
gaagaacacgacagctcctacaaacagcaggagggctggcgctaccacgcccgtgattta
gcagtcttccgtgccagagaggaagatattccgatcgtcatgggaacggcgacgcccgca
ctggaaacgctgtataacgtccaagtcggcaagtatcgccgattgaatctgaccaaaaga
gcgggtaatgccgcactggccaaacagcatgttatcgatctgaaaagcttgccgctgaca
gcaggattatctcagccgctgattacccgtatccgtcaccatctgacgaacgataatcag
gttattttgttccttaatcggcgcgggttcgctcccgtggtgatgtgccatgagtgcggc
tggatcgccgagtgtcagcgctgcgatcactattatacctaccaccagcatcagaagatg
ttgcgttgccaccactgcgacagccagcgtccggttccacaacagtgccccggctgcggc
tcgaccaatatggtgcccgtcggtctgggcaccgagcagttggagcaaagtcttgccccg
atctttccagatgtcccgatcacccgcatcgaccgtgataccactagccgtaaaggcgcg
cttgagcagcagctctcacaggtcaggctgggaggcgcacgccttcttatcggcacgcag
atgttggcgaaaggccaccatttccctgacgtaacgctggttgccttactggacgttgac
ggttcgctgttctccgccgacttccgcgcagccgaacgttttgcccagctctacactcag
gtagcaggtcgcgcagggcgtgcaggcaaggctggcgaggtggcgctgcaaactcatcac
ccggaacacccgctattacaaacgctgctgcggcaaggctatgatgcctttgccagccag
gcgcttaccgaacgaaaaagtgtttttctgccgccgtttaccagccatatcatcttccgc
gctgacgatcacgataatcagcaggccgctttattcctccagcagctgcgtaatttgctg
gaggctagcccgttgcgagatgaatcactctggctgctgggtccggtgcctgctttgcag
ccaaaacgtgcggggcgcttccgctggcagcttttgctacagcacccctccagagcgttg
ttacagaaactggtcagaacgtcgttggcgctgatcggtacgctaccgcaagcacgtaaa
gtgaaatggatgctggatgtcgaccccacagacggttag
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