Pectobacterium atrosepticum JG10-08: EV46_21375
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Entry
EV46_21375 CDS
T03199
Name
(GenBank) type IV secretion protein Rhs
Organism
patr
Pectobacterium atrosepticum JG10-08
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
Endonuclea_NS_2
TEN_YD-shell
DUF4595
RHS
Motif
Other DBs
NCBI-ProteinID:
AIA73054
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Position
4744141..4748430
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AA seq
1429 aa
AA seq
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MRDEILARIARVGAMHAGNRPTLPPDLPAPGSGSPPTSPDKPIKHSSFLGALLGAVAGAL
VAAAVAAVAVALVGVTGGLAIALVGGLAVLGAGSLISAVSGRVSAMVDSASPPAGAVADG
SPNVSVEGNPVSRAEVDAVACTKHSGPQLIAQGSETVFVNGHPAARIGDKTVCGATIKEG
ASTVFFGSGQATVLEIQDEFSGWQKALLIAVEFLVPPTRGLFRGLGKLFFRGPKAVMKGL
GAGALWAGKRFKQKTRCATRAFKANKGRARVTQAAKAFKKDPVYIASGEVIENRTDIELG
QTLPLVFERTYRTASSHVGLLGHGWQDSWSEVATVSRDDGDTHVVITLAQGYNIDFTFGV
GTTVVYCAEYPEFKLVRRHNGFHLWHRDSQTWRAFTVRQDDQLLLSAITDNHFNRIDFIR
DPKGYLRKVQHSDGIELLLVWQGEFLRQVQRIDGGQKTVLAEYRQDEQGRLIEADAAHAY
HLFYEYDNHNRLARWHDNDQTWAQYEYDHQGCCIYTTCADGYLTANFEYLADRVVMTDGL
GQRHEYGFNDLYLMTWEKSPLGHITRFEYDDVGNLLREISPAGRMVEFAYLGDSGLVSTF
TDGSGHQWHYDYDDSDRLTSITDPLGRNWVWQYDTKGNPQSLTGPDNSEVHFAWNRYGLL
TEVSDQGGQVQASLFYDHRQRLLSATDAESRTQQLRYDQQDRLTTWTRPDGSTYRLGYRR
ASWKLPEQLLRPDDKQEQRQYDKHNNLLNYTDGNGAVWRQTYGPFDLLTSRTDAEGRTWR
YEYDKESQQLVAVIAPDGNRWQWWLDADARVIREQDMAGTETRYGYDEDGHCISIHNGEG
ETRHFLYDGRGLLIKETAPDDTLHYRYDGAGRLTEVTSATSYIQLSYDVRDRVVQERNSG
TEIRRHYQAESDAVTRSLYWEGEESSAALTSTFRYSATGELRQVQLPDDAELTLAHDAAG
REAARNSNGGFMQQREYDAMGWLTREMSGQQRDGRLQAEQSREHLYDGAGNLTGTRHNRE
AEGYRLDASGRVLTVLSGGTGRTVNTEEEYRYTRTGLPQDATRLTEWQASRLIQRDDTHY
QYDKAGRLIRKQVVQPGYRPQVWHYRWDSRNQLRVVDTPTGERWFYRYDPFGRRTGKRCD
QKAEDIRYLWDGDQIAEVRHYRENQLISRRHWVHNGWELLVQQRQNTDGNWETDFVTSSH
NGEPQAIFNQAGELRWQAPRTNLWGHRTTDNTESLDPGLAFAGQYRDEESGLCYNRFRYY
DPSGGCYISPDPIGIAGGESNYGYVQNPVCWIDPFGLAKCPTLTHGANGEILSAKATVSK
AELRTGSATNQSSRDYARSLGDQTDDAGHILGNVLGGQGGKGNVFPQLPGINRGQYRDFE
KVVKDYIGQNGSVDIEWAFKYGNSGTRPTEIYYDVYQNGQKVFGRIFNN
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatgaaattctggctcgtattgcgcgggtgggtgcgatgcacgccggcaaccgc
cccacgctgccgcccgatttacccgcacccggcagtggttctccccccacttcaccggac
aagcccatcaaacacagcagctttctgggggcgttgctcggtgccgttgccggggcccta
gtggcggcagcagttgccgcggtcgcggtcgcgttggtcggggtgacgggcgggctggcg
attgcactggtaggcggattggcggtactgggggcgggtagtctgatatctgcggtaagt
ggccgggtatccgccatggtagacagcgcctcgccgcccgccggagcggtggctgacggt
tcacctaacgtgtctgttgaaggcaaccctgtatcccgggcggaagtcgatgcagtggcg
tgtaccaaacatagcggcccgcaactcattgcacagggcagcgaaaccgtcttcgttaac
ggtcatccggccgcgcggataggcgataaaaccgtgtgtggtgctaccatcaaggaagga
gcatctaccgtattctttggctccggacaggctacggtactggagatacaagatgagttc
agcggttggcagaaagcgctgctgattgcggtggaatttcttgtgccaccgacgcgtggg
ttatttcgcgggctggggaaattattctttcgcggccctaaagcggtcatgaaagggctg
ggtgccggagctctctgggcgggtaaacgctttaagcaaaagacacgctgtgccacccgc
gcatttaaggcgaacaaaggccgggcgcgggtgacccaagcggccaaagccttcaagaaa
gacccagtgtatatcgccagcggcgaggtgattgaaaaccgcactgatatcgaactgggg
cagactcttccactggtgttcgaacgcacctaccgtaccgcctcttcacatgtcggatta
ttaggccatggctggcaggatagctggagcgaagtcgctaccgtcagccgtgatgacggc
gacacccatgtagtcattacactggcacagggctacaacatcgatttcaccttcggggtg
ggcactacggtggtgtactgcgccgaatacccggagttcaaactagttaggcggcataac
ggctttcacctgtggcaccgtgacagccagacctggcgtgcgtttaccgtcaggcaggat
gaccagctattgttgtcggccatcactgacaaccatttcaaccgaatcgattttatccgc
gaccccaaaggctacctgcgcaaggtgcagcacagcgacggcatcgagctgctgctggta
tggcaaggggaatttctccgccaggtgcaacgtatcgacggcgggcagaaaaccgtgctg
gccgaataccggcaggatgaacaagggagactgatcgaggccgatgcggcgcatgcctat
cacctgttctacgagtacgataaccacaaccgcttggcgcgctggcacgacaacgaccag
acctgggcacagtatgaatatgaccatcaggggtgctgcatttacaccacctgcgccgac
ggctacctgaccgccaacttcgagtatctggcagaccgcgtggtgatgacagacgggctg
ggacaacgccatgaatatggctttaatgacctgtacctgatgacatgggagaaatccccg
ctcggccatatcacccgctttgagtatgacgatgtcggtaatctgctacgggaaatctcc
cctgcgggccggatggtggaatttgcctatctgggcgacagcgggctggtcagtaccttc
accgatggcagtggccatcaatggcattacgactatgacgacagcgatcgcctcaccagt
atcaccgaccctctcgggcgcaactgggtctggcagtacgacacgaagggcaatccgcaa
agcctgaccgggccggacaacagcgaagtgcattttgcgtggaaccgctacggcctgctg
accgaagtcagtgaccaaggtggacaggtgcaggccagtctgttttacgaccatcgacag
cgcctgctcagtgccacggatgcggagtcccgcactcaacaactacgctacgaccaacag
gacagactgaccacctggacacgcccggacggttccacctatcgcttgggttatcgccgt
gccagttggaaactgccggaacaactgctacgcccagacgacaagcaagaacagcgtcaa
tacgacaaacacaacaacctactgaattacactgatggcaacggcgcggtttggcggcaa
acctatggcccattcgatcttctgacgtcccgtaccgatgcggaaggccgcacctggcgt
tacgagtacgacaaagagagccaacaactcgtcgctgttatcgccccagatgggaaccgc
tggcaatggtggttggatgccgatgcacgggttatccgcgagcaggatatggctggcacc
gaaactcgctacggctatgacgaggatggccactgcattagcatccacaacggcgaaggc
gaaacccgccacttcctgtacgacggacgcgggctactcatcaaagaaaccgcaccggac
gatacgctgcactaccgctacgatggggcaggccgacttactgaagtgacgtctgcgacc
agctatatccagttgtcgtatgacgtacgagaccgagtggtgcaggaacggaacagcgga
acagaaatccgacgccactatcaggcagagtctgacgccgttacccgcagcttgtactgg
gaaggcgaagagagcagcgcggcactcaccagcaccttccgctatagtgccacgggtgaa
ctgcggcaggtgcagttgccggatgacgcagagctaacgttggctcacgacgccgcagga
cgagaagccgcccgaaatagcaacggcggctttatgcagcagcgcgaatacgacgccatg
ggctggctgacgcgcgagatgagtgggcagcagcgggatggtcgtttacaggccgaacag
agccgtgaacatttgtatgatggcgcaggcaacctaacgggcacccggcacaaccgcgag
gccgaaggctaccggttggatgccagcggacgagtgctaaccgtcctgagcggcggcaca
ggccgtaccgtcaataccgaagaagaataccgctacacccgcaccggcctgccgcaggac
gccacaagattgaccgagtggcaagcgagcaggcttattcagcgtgacgatacccactat
cagtacgacaaagccggacggctgatacgcaaacaggtggtacagccaggctaccggccg
caggtttggcactaccgctgggacagtcgtaaccagctcagagtggtggacacgccaacg
ggtgagcgctggttctaccgttacgacccattcgggcgacgcaccggcaaacgctgtgac
cagaaagcagaagacatccgttacctctgggacggcgaccagatagctgaagtgcggcat
taccgcgaaaaccagcttatcagccgccgccactgggtacacaatggctgggagttgctg
gtgcaacagcgccagaataccgacgggaattgggagacggattttgtcaccagcagccat
aacggcgagccgcaggctatctttaatcaggctggtgagcttcgctggcaggcgccgcgc
acgaacttatgggggcaccggactacagataatactgaaagtctcgatccggggctggca
tttgctgggcaataccgtgacgaagaaagtggcttatgctataaccgatttcggtattat
gatccaagcggtggttgctatatctcacctgacccaatagggatagcggggggtgagagt
aactatggttatgtccagaatccagtctgctggatcgatccgtttgggttggcgaagtgt
ccaacgttaactcatggtgctaacggggaaatattatcggccaaggctaccgtatcaaaa
gctgagcttagaacgggttctgcaacgaatcaaagctccagagactacgctcgttcatta
ggtgatcaaaccgatgatgctgggcatatattaggcaacgttcttggtgggcaaggcggt
aaaggtaacgtgttcccacaattacctggtattaaccgtgggcaatacagagatttcgag
aaagttgtcaaagattatataggtcagaatggttcggttgatatcgagtgggcctttaaa
tacggtaatagcggaacccgccctacagaaatctactatgacgtctatcaaaatgggcag
aaggtttttggtagaatatttaataactaa
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