Patiriisocius sp. Uisw_047: ABXT71_06195
Help
Entry
ABXT71_06195 CDS
T11300
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
patu Patiriisocius sp. Uisw_047
Pathway
patu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
patu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABXT71_06195 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
patu03019
]
ABXT71_06195 (groL)
03110 Chaperones and folding catalysts [BR:
patu03110
]
ABXT71_06195 (groL)
03029 Mitochondrial biogenesis [BR:
patu03029
]
ABXT71_06195 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
patu04147
]
ABXT71_06195 (groL)
Enzymes [BR:
patu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABXT71_06195 (groL)
Messenger RNA biogenesis [BR:
patu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABXT71_06195 (groL)
Chaperones and folding catalysts [BR:
patu03110
]
Heat shock proteins
HSP60 / Chaperonin
ABXT71_06195 (groL)
Mitochondrial biogenesis [BR:
patu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABXT71_06195 (groL)
Exosome [BR:
patu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABXT71_06195 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABXT71_06195 (groL)
Exosomal proteins of breast cancer cells
ABXT71_06195 (groL)
Exosomal proteins of colorectal cancer cells
ABXT71_06195 (groL)
Exosomal proteins of bladder cancer cells
ABXT71_06195 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
XOK05389
LinkDB
All DBs
Position
complement(1389530..1391155)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKDIKFDLEARDGIKRGVDALANAVKVTLGPKGRNVIISKSFGAPQVTKDGVTVAKEIE
LEDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVAAIVKDLEKQAIKVGNDSDKIKQVAAISSNNDEQIGDLIAKAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGFLSPYFVTNSEKMTTELENPMILLCDKKISSMKDLLPILEPV
AQQGKALLIVAEDLDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAVLTGGTV
ISEERGFTLENATIEMLGTAETVTIDKDNTTIVNGAGKKSDIQTRVGQIKSQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKAVLSKITTDNMDETTGVQIVARAIEAPLRTIVENAGGEGSVVISKVAEGKKHFGYDA
KSETYVDMIKAGIIDPKKVTRIALENAASVAGMILTTECALIDIKEDTPMAPMGGGMPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgacttagaagcacgcgacgggataaagcgcggtgttgat
gcattagcaaatgcagtaaaagtaacattaggcccaaagggacgtaatgtaattatcagt
aaatcatttggcgcaccgcaagtaaccaaagatggtgtgacggtagcaaaagagattgag
ctagaagacccactcgagaatatgggcgcacaaatggtaaaagaagtagcaagtaaaacc
aatgatcttgcaggtgacggtactactactgcaaccgtactcgcacaagcaattgtaaaa
gaaggtttaaaaaatgttgctgcaggtgcaaaccctatggatcttaaaagaggtatcgac
aaagctgttgctgcgattgtaaaagaccttgaaaagcaggcaattaaagtaggaaacgat
agtgataagatcaaacaagtcgcggctatttcttcaaataacgatgagcagattggtgat
ttaattgctaaagcttttggtaaagttggtaaagaaggagtaatcactgttgaagaagct
aaaggaacagatacctatgtagatgttgtagaaggtatgcagtttgatagaggtttcttg
tctccttatttcgttacaaatagcgaaaagatgactaccgaacttgaaaacccaatgatc
cttttatgtgataagaagatttcttcaatgaaagatttacttcctattcttgagccagtg
gctcaacaaggaaaagcactattgatagttgctgaagatctagatggtgaagccttagct
acattagtagtaaacaagcttagaggttctttaaaaattgctgctgtaaaagcaccaggt
tttggagatcgtagaaaagcaatgctagaggacatagcagtacttactggaggaaccgtt
atttctgaagaaagaggattcacactagagaatgcaactatagaaatgcttggtactgca
gaaacagtaacaatagacaaagacaacacgactattgtaaatggtgctgggaagaaaagt
gacattcagacgagggtaggtcaaattaaatctcaaattgaaacaacaacgagcgactac
gataaagagaagttacaagaaagactggctaagttagctggaggagtagctgtattgtat
gttggtgctgcttcagaagtagagatgaaagaaaagaaagatcgtgtagatgatgcactt
cacgcaacgagagctgcagtagaagaaggtattgtcgccggtggtggcgttgccctagtg
cgtgctaaagccgtattaagcaaaatcacaacggacaatatggatgaaactaccggtgtt
caaatcgtagcaagagctattgaagcgcctttacgcaccattgtagagaatgctggtggc
gaaggaagtgtagtgattagtaaagtagcagaaggtaaaaaacacttcggatacgatgct
aaaagcgaaacatacgtagacatgataaaagcaggaattattgatcctaaaaaagtaact
agaattgcactagaaaatgcagcttcagttgccggaatgatcttgacgactgagtgtgca
ttaatagacatcaaagaagatactcctatggcccctatgggcggagggatgccaggaatg
atgtag
DBGET
integrated database retrieval system
