Patiriisocius sp. Uisw_047: ABXT71_06915
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Entry
ABXT71_06915 CDS
T11300
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
patu Patiriisocius sp. Uisw_047
Brite
KEGG Orthology (KO) [BR:
patu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
patu03032
]
ABXT71_06915 (gyrB)
03400 DNA repair and recombination proteins [BR:
patu03400
]
ABXT71_06915 (gyrB)
Enzymes [BR:
patu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABXT71_06915 (gyrB)
DNA replication proteins [BR:
patu03032
]
Prokaryotic type
DNA Topoisomerases
ABXT71_06915 (gyrB)
DNA repair and recombination proteins [BR:
patu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABXT71_06915 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XOK03111
LinkDB
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Position
1536327..1538267
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AA seq
646 aa
AA seq
DB search
MSEEKNKGNYGADQIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGHC
DLVNVWINEDNSVTVKDNGRGIPVDIHKKEGVSALQVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSVVNALSSLLKATVYRDGKVYEQEYERGKSMYPVKQVGETEERGTLVTFRPDEQIF
QQTIEYNYDTLASRLRELSYLNKGITITIEDRRFTEENGDFKGETFHSTEGLKEFIRFLD
GNREMLIADVISMEGEKNDIPVEVAMVYNTSYSENLHSYVNNINTHEGGTHLSGFRRGLT
HTLKKYADASGMLDKLKFDITGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVSSAVS
QAVSEMLENYLEENPNDAKTIVQKVILAATARHAARKAREMVQRKTVMSGGGLPGKLSDC
SEQDPEKCEVFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIRNI
FTALGVTIGTEEDSKALNLAKLRYHKVVIMCDADVDGSHISTLILTFFFRYMKELVEGGY
VYIATPPLYLVKKGAKKEYAWNDKDRDMLNEKFGGSASIQRYKGLGEMNASQLWDTTMNP
EFRTLRQVAIDNGTEADRIFSMLMGDEVPPRREFIEKNAVYANIDA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaaaaacaaagggaattacggcgcagatcaaattcaggcattagaggga
atggagcacgtgcgtatgcgtccatcgatgtatatcggagatgtaggagtgcgaggttta
caccatcttgtgtatgaggttgtggacaactcaattgatgaagcacttgctgggcattgt
gatctggtgaatgtttggattaatgaagataacagtgtaactgtaaaggataatggtcgt
ggtattcctgtagatattcataaaaaagaaggtgtttctgccctacaggtagtgatgaca
aaaattggtgcaggaggtaaatttgataaagacagttacaaagtgtctggtggactgcac
ggggtaggagtttctgttgtgaacgcactttcatctttactaaaggctaccgtatatcgt
gacggaaaagtctatgagcaggaatatgagcgcggaaaatctatgtacccggtaaagcag
gtgggcgagacagaggagcgagggactttagtaaccttcaggcccgatgagcagatattt
cagcaaacaatagagtataactatgacacccttgcaagcagattaagagagctttcttat
ctgaataagggtatcaccatcaccatagaagatcgtcgctttacagaagagaatggtgat
tttaaaggtgagacttttcactctacagaggggcttaaagaatttatccgttttctagat
ggaaaccgtgagatgttgatcgcagatgttatctctatggaaggagagaagaacgatatt
cctgtggaggttgcgatggtgtacaatacatcatatagtgagaacctacactcgtatgtg
aataatattaacacacacgaaggtggaacccatttatctggtttcagacgtgggttgaca
catactttaaagaagtatgcagatgcttctggtatgctagataagctgaagtttgatatt
acaggtgatgactttagagaagggttaacagctattatttctgtaaaggtacaggagcct
cagtttgaaggacaaacaaaaacaaaattagggaacagagaagtgtctagtgcagtaagc
caagcggtttctgaaatgctagaaaactatctagaagaaaaccctaatgatgctaagact
atcgtacaaaaagtaatccttgcagcaacggcgagacatgcagcgcgtaaagcccgtgaa
atggtacagcgaaaaactgtgatgagcggtggaggtttgccaggaaaactatctgattgc
tctgagcaagatcctgaaaaatgtgaagtgtttcttgtggagggagattcggcaggtggt
acggcaaagcagggtcgtgatcgtaattttcaggctattttgccattacgtggtaagatc
ttgaacgtagagaaagcgatgcagcacaaagtatttgagaacgaagagatacgaaatatt
tttacagcactcggtgttaccattggtacagaagaagatagcaaagctctaaacttagca
aaactaagatatcataaagtagttattatgtgtgatgccgatgtagatggtagtcacatt
tctaccttaatattaacctttttctttaggtatatgaaagaactggtagagggagggtat
gtgtatatcgcaactccacctttatatttagtgaagaaaggtgctaaaaaggagtatgct
tggaatgataaagaccgtgatatgttaaatgagaagtttggcggaagcgcttctatccag
cgttacaagggtcttggagagatgaatgcaagccaattatgggatactacaatgaatcca
gaatttagaacgctacgccaagtggccattgataatggtacagaggcagatagaatattc
tccatgcttatgggtgatgaggtgccgccaagacgtgagtttattgagaaaaatgcagta
tatgcaaacatagacgcctag
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