Pseudomonas aeruginosa UCBPP-PA14: PA14_12630
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Entry
PA14_12630 CDS
T00401
Name
(GenBank) putative ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
pau
Pseudomonas aeruginosa UCBPP-PA14
Brite
KEGG Orthology (KO) [BR:
pau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pau03019
]
PA14_12630
Enzymes [BR:
pau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PA14_12630
Messenger RNA biogenesis [BR:
pau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PA14_12630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
Helicase_C
HA2_N
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ABJ13237
UniProt:
A0A0H2ZFN8
LinkDB
All DBs
Position
1082719..1085211
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AA seq
830 aa
AA seq
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MFPPCARPLVHNTRPSWKPRRVPARPPGCRWPCSTSPGSPANASSCSNRDAWRRGPRPSG
WPPSWAKRVGETVGYGIRLESRVGPKTRIEVVTEGILARRLQDDPALDGVGLVIFDEFQE
RSLDADLALALTLNGRELLRDEPPLKVLVMSATLEGERLAALLGEAPVVRSEGRMFPVDI
RWGRAAQPGEFIEPRVQQAVLQALAEESGSVLVFLPGQAEIRRVHEGLREALGGRPEVLL
CPLHGELDLAAQRAAIEPASRGTRKVVLATNIAETSLTIDGVRVVIDAGLARVPRFDPGS
GMTRLETQRISRASATQRAGRAGRLEPGVCYRLWSESQHEQLPAYGTAEILQADLAGLAL
QLARWGVAPEELAWLDAPPAAAYAQARELLGRLGALNASGALSAHGQAMAALPTHPRIAH
LLLRGQALGLGELACDVAALLGERDIQRGGGADLHSRLALLAGEARAGASRGAVQRARQL
ARQFRGYLRGAASEAVVDPGHPRWLGCLLAFAYPDRIARQRRAGGGDYRLANGRAAQFGE
PDSLMKQPWLVIADLGSRQGQREERIYLAAELDPRLFDTVLAEQVSQRDELQWDEREGVL
RAERQRRVGELVLSSEALPGLDEAARSQALLGLVRRKGLELLPWTPELRQWQARIGLLRR
LDLEDKGESEWPDVSDAALLERLEEWLPAYLGKVTRLAHFANLDLASILAGLLPWPLPQR
LDEWAPKTLEVPSGSRIRLDYSETPPILAVRLQELFGLGDTPRIAQGRLAVKLHLLSPAH
RPVQVTQDLANFWRSTYAEVRKDLKGRYPKHYWPDDPLVAEATARAKPRK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
ttgttcccgccctgcgccaggcccttggtgcacaacaccaggccgtcctggaagccccgc
cgggtgccggcaagaccacccgggtgccgctggccctgctcgacgagccctggctcgccg
gccaacgcatcctcatgctcgaaccgcgacgcctggcggcgcgggccgcggccgagcggc
tggccgccgagctgggcgaaaagggtcggcgagaccgtcggctacgggatccgcctggaa
agcagggtcggcccgaagacccgcatcgaagtggtcaccgagggtatccttgcccgtcgc
ctgcaagacgacccggcgctggacggtgtcggcctggtgatcttcgacgaattccaggag
cgcagcctggatgccgacctggccctggcgctgactctcaatggccgcgaactgttgcgc
gacgagccgccgctgaaagtgctggtgatgtcggcgaccctggagggcgagcgtcttgcg
gcgctgctcggcgaagcgccggtggtgcgcagcgagggccgcatgttcccggtggatatc
cgctggggacgggcggcgcaacccggcgagttcatcgagccgcgggtgcagcaggcggtg
ctccaggcgctggcggaggaaagcggcagcgtgctggtctttcttcccggccaggccgag
atccgccgcgttcacgaaggcttgcgcgaagcccttggcggacgccccgaggtgctgctc
tgcccgctgcatggcgagctcgacctcgccgcccagcgcgccgccatcgagccggcgtcg
cggggcacgcgcaaggtggtgctggcgaccaacatcgccgagaccagcctgaccatcgac
ggcgtacgggtggtgatcgacgccggcctggcgcgggtgccgcgcttcgatccgggtagc
ggcatgacccgcctggagacccagcgcatctcccgcgcctccgctacccagcgtgccggc
cgcgcagggcgcctggagccgggcgtatgctaccgcttgtggtcggagagccagcatgag
cagttgcctgcctacggcacggcggaaatcctccaggccgatctggccgggctggccctg
caactggcgcgctggggcgtggcgccggaggagctggcctggctcgacgcgccgcccgcg
gcggcctacgcccaggcccgcgagctgctcgggcggctgggggcgctgaacgccagcggt
gcgttgagtgcccatggccaggcgatggccgcattgccgacccatccgcgcattgcccac
ctgctgctgcgcggccaggccctcggccttggcgaactggcttgcgacgtagcggcgctg
ctcggcgaacgtgacatacagcgtggcggcggcgccgacctgcacagccgtctcgccctg
ctcgccggcgaggcccgcgctggcgcctcgcgcggcgcggtacagcgcgcccggcaactg
gcccggcagttccgcggttacctgcgcggcgccgccagcgaagcggtcgtcgatcccggc
catcctcgttggctgggctgtctgctggccttcgcctatcccgaccgcatcgctcgccag
cgccgcgccggcggcggcgactaccggctggccaatgggcgcgctgcgcagttcggcgaa
ccggacagcctgatgaagcagccctggctggtgatcgccgatctgggcagccgccagggc
cagcgcgaagagcggatctacctggccgccgaactcgatccgaggttgttcgatacggtc
ctggcggagcaggtcagccagcgcgacgagctgcagtgggacgagcgcgaaggcgtgctg
cgcgccgagcgccagcgccgggtcggcgaactggtgctgtccagcgaggcgctacccggc
ctcgacgaagcggcgcgcagccaggcgctgctcggcctggtccggcgcaagggcctggag
ttgttgccctggaccccggaactgcgccagtggcaggcgcgcatcggcttgctgcgccgg
ctggacctggaagacaagggcgagagcgagtggccggacgtcagcgacgccgcgttgctg
gaacggttggaggaatggttgccggcctatctcggcaaggtcacccgcctggctcacttc
gccaacctcgacctggcttcgatcctcgccgggctgctgccctggccattaccgcagcgt
ctcgacgagtgggcaccgaaaaccctggaagtcccctccggctcgcgcatccgcctggac
tacagcgaaaccccgccgatcctcgcggtgcgcctgcaggaactgttcggcctcggcgac
actccgcgcatcgcccagggccgcctggcagtgaagctgcacctgctgtctcccgcgcat
cgtccggtgcaggtgacccaggacctggcgaacttctggcgcagcacctatgcggaagtc
aggaaggacctgaagggacgctatccgaagcattattggccggacgacccgctggtggcc
gaggccactgcccgggccaagccacgcaagtag
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