Pseudomonas aeruginosa UCBPP-PA14: PA14_12760
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Entry
PA14_12760 CDS
T00401
Name
(GenBank) probable ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pau
Pseudomonas aeruginosa UCBPP-PA14
Pathway
pau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA14_12760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pau03019
]
PA14_12760
Enzymes [BR:
pau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PA14_12760
Messenger RNA biogenesis [BR:
pau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PA14_12760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABJ13226
UniProt:
A0A0H2ZFL6
LinkDB
All DBs
Position
1093058..1094407
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AA seq
449 aa
AA seq
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MTFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLL
QRLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK
LRKGVDILVATPGRLLDLYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR
QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLLQ
ANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLVA
TDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAIE
TLIGQTLQRREEPDFAPEHRVPQTAPGGVVLKKPKKPKKPKAAESAGKPGKIHLGSWFDS
SAPTVKAVRKAPGFGAGAAGKPKKRPSGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgcttccctcggtctgctcgaccccctgctcaaggccctcgaagggctcggc
cacggcacgcctacgccgatccaggcccaggccatacccccggcgctcaagggccgcgac
ctgctcgccgcagcacagaccggcaccggcaagaccgccggtttcgccctgccgttgctg
cagcggctgaccctggaggggccgcaggtcgctgcgaactcggtgcgtgcactggtcctg
gttccgacccgcgaactggccgagcaggtccacgccagcgtccgcgactacggccagcac
ctgccgctgcgtaccgcggtggcctacggtggggtcagcatcaacccgcagatgatgaag
ctgcgcaagggggtggatatcctcgtcgccactcccgggcggctgctcgacctgtatcgg
cagaacgcggtgaagttcgcccagctccaggcgctggtgctggacgaagccgatcgcatg
ctcgacctcggtttcgcccgcgagttggacgagctgttcgccgcgctgccgcgcaagcgc
cagaccctgctgttttccgcgactttctccgacgccatccgcacgctggcccgcgaactg
ctgcgcgacccgctgtccatcgaggtcagtccgcgcaataccgcggcgaagagcgtcagg
caatggctggtgccggtggacaagaagcgcaaggccgagctgttctgccacctgttgcag
gccaatcgctggcgccaggcgctggtcttcgccaagacccgcaagagcgtcgaggaactg
gtcggactgttgcagcgccagggtatcgccgccgactcgatccatggcgacaagccgcag
ccggcgcggctgcgcgccttgcagcggttcaaggccggcgaggtagacctgctggtagcc
accgacgtggccgcgcgtggcctggatatcgaggaaatgccgctggtggtcaacttcgac
ctgccgatcgtcgccgaggactacgtgcatcgcatcggccgtaccggccgtgccggggcc
tccggccaggcggtgtcactggtctgcgccgacgaagtggagctgctggcggcgatcgag
acactgatcgggcagaccctgcagcgccgcgaggagcccgacttcgcgccggaacaccgg
gtgccgcagaccgcgccgggcggcgtggtgctgaagaaaccgaagaagccgaagaaaccc
aaggccgcggagagcgccggcaagcccggcaagatccacttgggcagttggttcgacagc
agcgcgccgacggtcaaggcggtgcgcaaggcgccgggcttcggcgcgggcgcggcgggc
aagccgaagaagcggccgtccggcaaatag
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