Pseudomonas aeruginosa UCBPP-PA14: PA14_14040
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Entry
PA14_14040 CDS
T00401
Symbol
rhl
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pau
Pseudomonas aeruginosa UCBPP-PA14
Pathway
pau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA14_14040 (rhl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pau03019
]
PA14_14040 (rhl)
Enzymes [BR:
pau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PA14_14040 (rhl)
Messenger RNA biogenesis [BR:
pau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PA14_14040 (rhl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
TMEM260_2
Motif
Other DBs
NCBI-ProteinID:
ABJ13128
UniProt:
Q02S21
LinkDB
All DBs
Position
complement(1203010..1204203)
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AA seq
397 aa
AA seq
DB search
MVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKT
AAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVG
GMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQV
RQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVA
GSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTL
EGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISF
AGEDDAFALPPIEELLGRKITCEMPPAELLKPVPRKH
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgaaccgcaggaaggcaagacccgcttccacgacttcaacctcgccccgagcctg
atgcacgccatccatgacctcggcttcccctactgcacgccgatccaggcgcaggtactg
ggcttcaccctgcgcggccaggacgccatcggccgcgcccagaccggtaccggcaagacc
gccgcgttcctcatctcgatcatcacccagttgctgcagaccccgccgccgaaagagcgc
tacatgggcgagccgcgcgcgctgatcatcgccccgacccgcgaactggtggtacagatc
gccaaggacgccgcggcgctgaccaagtacaccgggctgaacgtgatgaccttcgtcggc
ggcatggacttcgacaagcaactcaagcagctggaagcgcgcttctgcgacatcctggta
gccacccccggccgtctgctggacttcaaccagcgcggcgaggtgcacctggacatggtc
gaggtgatggtcctcgacgaagccgaccgcatgctcgacatgggctttatcccgcaggtc
cggcagatcatccggcagaccccgcacaagggcgaacgccagaccctgctgttctcggcg
accttcaccgacgacgtgatgaacctcgccaagcagtggaccgtcgatccggcgatcgtc
gagatcgagccggagaacgtcgccagcgataccgtcgagcagcatgtctacgccgtggcc
ggcagcgacaagtacaagctgctgtacaacctggtggcgcagaacaactgggaacgggtg
atggtcttcgccaaccgcaaggacgaagtccgccgcatcgaggaacgcctgaccaaggac
ggcatcagcgccgcccagatgtccggcgacgtgccgcagcacaagcgcatccgcaccctg
gaaggcttccgcgaaggcaagatccgcgtcctggtggcaaccgacgtggccggccgcggc
atccacatcgacggcatcagccatgtgatcaacttcaccctgccggaagacccggacgac
tacgtgcaccgtatcggtcgtaccggccgcgccggcgcctcgggtacctcgatcagcttc
gctggcgaggacgatgccttcgccctgccgccgatcgaagaactgctgggccgcaagatc
acctgcgagatgccgccggccgaactgctcaagccggtaccgcgcaagcactga
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