Pseudomonas aeruginosa UCBPP-PA14: PA14_16220
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Entry
PA14_16220 CDS
T00401
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pau
Pseudomonas aeruginosa UCBPP-PA14
Pathway
pau03410
Base excision repair
pau03430
Mismatch repair
pau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PA14_16220 (recJ)
03430 Mismatch repair
PA14_16220 (recJ)
03440 Homologous recombination
PA14_16220 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pau03400
]
PA14_16220 (recJ)
DNA repair and recombination proteins [BR:
pau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PA14_16220 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PA14_16220 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PA14_16220 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ABJ12958
UniProt:
A0A0H2ZDT5
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All DBs
Position
1385519..1387234
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AA seq
571 aa
AA seq
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MRIEPRPLPETLPDLGDLPPLLARLYAARGVRCAEELDKGLARLIPFQRLKGIEEGVALL
VDALEGGQRILIVGDFDADGATASSVGVLALRMLGAAWVDYLVPNRFEYGYGLTPEIVGV
ALEKRPDLLVTVDNGISSVDGVQAAKAAGLKVLVTDHHLPGPELPAADAIINPNQPGCEF
PSKAMAGVGVIFYVMLALRARLRELDWFARRGLKEPNLAELLDLVALGSVADVVPLDANN
RILVHQGLARIRAGRARPGLRALLEVAGRPPVRITSTDLGFILGPRLNAAGRLDDMSLGI
ECLLCDDEALARDMAVQLDQLNQDRKAIEQGMQREALAQLKELSLEQLPFGLCLFDADWH
QGVIGILASRLKERYHRPTIAFADAGDGSLKGSARSIPGFHIRDALDAVAARHPGLISKF
GGHAMAAGLSLPQENFGAFSAAFDAEVRRQLAEEDLAGRLLSDGQLSIQEFHLELARALR
QAGPWGQHFPEPMFHGVFQLVQQRIVGERHLKLVLKSECGSLQLDGIAFNIDREQWPNPT
VRWAELAYKLDVNEFRGQESVQLMIVHMAPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccccgccccctgcccgaaaccctgcccgatctcggcgaccttccgcca
ttgctggcacgcctgtacgcagctcgtggcgtgcgttgcgccgaggagctggacaagggc
ctggcgcggctgattcccttccagcggctgaaaggcatcgaggagggcgtggcgctgctg
gtggatgccctggagggcggccagcggattctcatcgtcggcgacttcgacgccgacggc
gccaccgccagcagcgtcggcgtgctggccctgcgcatgctcggcgcggcctgggtcgat
tacctggtgccgaaccgcttcgagtacggctacggcctgaccccggagatcgtcggcgtg
gccctggagaagcgtcccgacctgctggtgacggtggacaacggtatctccagcgtggac
ggcgtccaggcggcgaaagccgcggggctcaaggtgctggtcaccgaccaccacctgcct
ggcccggaactgccggcggcggatgcgatcatcaaccccaaccagccgggctgcgaattc
cccagcaaggccatggccggggtcggggtgatcttctatgtgatgctggcgttgcgggcg
cgcctgcgcgagctggactggttcgcccggcgcgggctgaaggaaccgaacctcgccgag
ctgctcgacctggtggcgctgggcagcgtcgccgatgtggtgccgctcgatgccaacaac
cgcatcctggtccaccagggcctcgcgcgcatccgcgccggccgcgcccggccgggcttg
cgcgcgctgctggaggtggccgggcggcctccggtacggatcacctccaccgacctgggt
ttcatcctcggtccgcgcctgaacgcggcgggtcggctcgacgacatgtctctcggcatc
gaatgcctgctctgcgacgacgaagcgctggcccgcgacatggcggtgcagctcgaccag
ttgaaccaggaccgcaaggccatcgagcagggtatgcagcgcgaggcgctggcgcagctc
aaggagctgagcctggagcaactgccgttcggcttgtgcctgttcgacgccgactggcac
cagggcgtgatcggaatcctcgcctcgcgcctgaaggagcgttaccaccggccgaccatc
gccttcgccgacgccggcgacggcagcctgaaaggctcggcacggtcgattcccggcttc
cacatccgcgacgcgctggacgcggtagccgcccgtcatcccgggctgatcagcaagttc
ggcggccacgcgatggctgccggactatcgttgccgcaggaaaacttcggcgctttctcc
gccgccttcgatgccgaagtacgccgccaactggccgaggaggacctggccgggcgcctg
ctctccgatggccagttgagcatccaggagttccacctggagctggcgcgcgcgttgcgc
caggcaggtccctggggccagcactttcccgagccgatgttccacggggtgttccagctg
gtgcagcagcggatcgtcggcgagcgtcacctgaagctggtgctgaaaagcgaatgcggc
tcgctgcaactggatggcattgccttcaacatcgaccgcgagcagtggcccaaccctacc
gtgcgctgggccgagctggcctacaagctcgacgtcaacgaattccgcggccaggaaagc
gtgcaactgatgatcgtccacatggcccctcgctga
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