Pseudomonas aeruginosa UCBPP-PA14: PA14_23340
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Entry
PA14_23340 CDS
T00401
Symbol
himD
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
pau
Pseudomonas aeruginosa UCBPP-PA14
Brite
KEGG Orthology (KO) [BR:
pau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pau03032
]
PA14_23340 (himD)
03036 Chromosome and associated proteins [BR:
pau03036
]
PA14_23340 (himD)
03400 DNA repair and recombination proteins [BR:
pau03400
]
PA14_23340 (himD)
DNA replication proteins [BR:
pau03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PA14_23340 (himD)
Chromosome and associated proteins [BR:
pau03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PA14_23340 (himD)
DNA repair and recombination proteins [BR:
pau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PA14_23340 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_euk_2
CATASP
Motif
Other DBs
NCBI-ProteinID:
ABJ12386
UniProt:
Q02PW7
Structure
PDB
PDBj
LinkDB
All DBs
Position
2025973..2026257
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERIVTHQGQLSAKDVELAIKTMLEQMSQALATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGESVRLDGKFVPHFKPGKELRDRVNEPE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggagttgatcgaacggatcgttacccatcaggggcaactgtccgcgaag
gatgtcgagttggcaatcaagaccatgctggagcaaatgtcccaagccctggcgactggg
gaccggatcgagatccgtggcttcggcagcttttccttgcactaccgcgccccgcgcgtc
ggtcgcaaccccaagaccggggagtcggtacgcctcgacggcaagttcgtgccgcacttc
aagccgggcaaggagttgcgggatcgggtcaacgagccggagtga
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integrated database retrieval system
