Pseudomonas aeruginosa UCBPP-PA14: PA14_27370
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Entry
PA14_27370 CDS
T00401
Symbol
deaD
Name
(GenBank) putative ATP-dependent RNA helicase, DEAD box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pau
Pseudomonas aeruginosa UCBPP-PA14
Pathway
pau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA14_27370 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pau03019
]
PA14_27370 (deaD)
03009 Ribosome biogenesis [BR:
pau03009
]
PA14_27370 (deaD)
Enzymes [BR:
pau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PA14_27370 (deaD)
Messenger RNA biogenesis [BR:
pau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PA14_27370 (deaD)
Ribosome biogenesis [BR:
pau03009
]
Prokaryotic type
rRNA helicases
PA14_27370 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABJ12080
UniProt:
A0A0H2ZCI6
LinkDB
All DBs
Position
2373795..2375498
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AA seq
567 aa
AA seq
DB search
MGLCGCIRGKPMTQETVGFAALGIHPNVLAAIVAVGYEEPSPIQAQSIPLILEGHDMIGQ
AQTGTGKTAAFALPLLSRIDPSRREPQMLVLVPTRELALQVATACETYSKQLPGVGVVAV
YGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEKLLATVQRLVLDEADEMLKLGFMDD
LEVIFEALPESRQTVLFSATLPASIRGIAERHLKQPKHVKIAAKTQTVARIEQVHLMVHA
DQKAGSIQRLLEVEQFDALIAFVRTKQATLDYAELLERQGYRAAALNGDMPQAQRERVIE
SLKDGSLDIVIATDVAARGLDVPRITHVLNIDMPYDPESYVHRIGRTGRAGREGRALLLV
TPRERRMLQVIERVTGQKVGEVRLPDAETVLEARLARLAASLTPLLDSAVEQRGAVRDEL
CRRLGCDAETLAAALLARLTAGKALDLESVRREQPLTPSAPRERADRGERGERPERSGER
RPMAPPSEGRARCRTALGARDGVAAKNLLGAILNEGGLSREDIGRIQIRDTFSLIELPEA
NLERLLTKLKDTRVAGKALRLRRYRED
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgggtctttgcggatgtatacgaggcaaacccatgactcaggaaaccgtcggcttcgcc
gcgctcggtattcaccccaatgtgctcgcggcaatcgtcgccgtaggctacgaagagcct
tcgcctatccaggctcaatcgattccgctgatcctcgaaggccacgacatgatcggccag
gcgcagaccggtaccggcaagaccgccgcgttcgccctgccgctgctgtcgcgcatcgac
ccgagccgtcgcgagccgcagatgctggtgctggtgccgacccgcgagctggccctgcag
gtcgccaccgcctgcgaaacctattccaagcaattgccgggcgtcggcgtggtcgccgtc
tacggcggcgcgcccatggggccgcaactgaaggccctgcgccagggcgcacagatcctc
gtcgctacccccggccgcctgtgcgaccacctgcgccgcgacgagaagctgctggccacc
gtccagcgcctggtgctcgacgaagccgacgagatgctcaagctcggcttcatggacgac
ctggaagtgatcttcgaggcgcttcccgaatcgcgccagaccgtgctcttctcggcgacc
ctgccggcgtccatccgtggcatcgccgagcgccacctgaagcagcccaagcacgtcaag
atcgccgccaagacccagaccgtggcgcgcatcgagcaggtccacctgatggtccatgcc
gaccagaaggccggttcgatccagcgcctgctggaagtcgagcagttcgacgcgctgatc
gccttcgtccgcaccaagcaggccaccctcgactacgccgaattgctcgagcgccagggc
taccgcgccgccgcgctcaacggcgacatgccgcaggcccagcgcgagcgggtcatcgag
tcgctgaaggacggttcgctggacatcgtcatcgccaccgacgttgctgcccggggcctg
gacgtaccgcgcatcacccacgtgctgaacatcgatatgccctacgaccccgagtcctac
gtgcaccgcatcggccgtaccggccgtgccggtcgggaagggcgcgcgctgttgctggtg
actccgcgcgagcggcgcatgctgcaggtgatcgagcgggtcaccgggcagaaggtcggc
gaagtccgcctgccggatgccgagaccgtactggaggcccgcctggcgcgcctggccgcg
agcctgacgcccttgctcgacagcgccgtcgagcagcgcggcgcggtgcgcgacgagctg
tgccgtcgcctcggctgcgatgccgagaccctggccgccgcactgctggcgcgcctgacc
gccggcaaggcgctggacctggagtcggtgcgccgcgaacagccgctgaccccatcggca
ccgcgcgagcgtgccgaccgtggcgaacgcggcgagcgtccggagcgcagcggcgagcgt
cgtccgatggcgccgccgagcgaaggccgtgcccgctgccgcaccgccctcggcgcgcgc
gacggggtcgcggcgaagaacctgctgggcgcgatcctcaacgagggcggcctgtcccgc
gaggacatcggccgcatccagattcgcgataccttcagcctgatcgaactacccgaggcc
aacctcgagcgcctgctgaccaagctcaaggacacccgcgtcgccggcaaggccctgcgc
ctgcgccgctatcgcgaggactga
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