KEGG   Pseudomonas aeruginosa UCBPP-PA14: PA14_34150
Entry
PA14_34150        CDS       T00401                                 
Symbol
sfnR
Name
(GenBank) putative sigma54-dependent transcriptional regulator
  KO
K11917  sigma-54 dependent transcriptional regulator
Organism
pau  Pseudomonas aeruginosa UCBPP-PA14
Brite
KEGG Orthology (KO) [BR:pau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pau03000]
    PA14_34150 (sfnR)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pau02044]
    PA14_34150 (sfnR)
Transcription factors [BR:pau03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PA14_34150 (sfnR)
Secretion system [BR:pau02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   PA14_34150 (sfnR)
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_5 Mg_chelatase HTH_30 AAA_2 AAA_16 AAA HTH_8 bpMoxR FixP_N AAA_3 Sigma70_r4
Other DBs
NCBI-ProteinID: ABJ11535
UniProt: A0A0H2ZA37
LinkDB
Position
3037579..3038664
AA seq 361 aa
MSVITHPHARELTKSVRATVLVFNDPRSRELLERIERLAPSEANALVIGETGTGKELVAR
HIHALSGRSGGPFVAVNCGAFAESLVESELFGHEKGAFTGALQSKAGWFEAANGGTLFLD
EIGDLPPSIQVKLLRVLQEREVVRLGSRRPIPIDVRLVAATNVDLAEAVVAGHFREDLFY
RLHVATIQLPPLRERRGDILPLAEYFIVEHCRRLGYTSASLSPEAERKLLGHSWAGNIRE
LENAIHHALLVCRNRLIQPADLHLIDMRARQEPSGLRRAPESAAGSALEAALQALFEENR
EDLYEHIEETVFRAAYRFCHGNQLQTGRLLGISRNIVRARLEKIGELETSPRHNVVSLVG
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtccgtcatcacccatccccacgcccgcgagctgaccaaatcggtgcgcgccaccgtg
ctggtgttcaacgacccccgttcccgcgagctgctggagcgcatcgagcgcctggcgccc
agcgaggccaacgcgctggtcatcggcgagaccggcaccggcaaggagctggtggcgcgc
catatccatgccctcagcggacgcagcggcggcccgttcgtcgcggtcaactgcggtgct
ttcgccgagagcctggtggagagcgagctgttcggccacgagaagggcgcctttaccggt
gcgttgcagagcaaggccggctggttcgaggcggccaacggcggcaccctgttcctcgac
gagatcggcgacctgccgccgagcatccaggtcaagctgctgcgcgtgctgcaggagcgc
gaggtggtgcggctcggttcgcgccggccgatccccatcgacgtgcggctggtggcggcg
accaacgtcgacctggccgaggcggtggtcgctgggcacttccgcgaggacctgttctac
cgcctgcacgtggcgaccatccaactgccgccgttgcgcgagcgccgcggcgatatcctg
ccgctggccgagtacttcatcgtcgagcactgccggcgcctcggctacaccagcgcgagc
ctgagcccggaagccgagcgcaagctgctcgggcactcctgggcgggcaatatccgcgag
ctggagaacgccatccaccacgcgctgctggtctgccgcaaccgcctgatccagccggcc
gacctgcacctcatcgacatgcgtgcgcgccaggagccgagcggcttgcgccgtgctccc
gagagcgccgccggctcggcgctggaagcggcgctgcaggcgctgttcgaggaaaaccgc
gaggatctctacgagcacatcgaggaaaccgtgttccgcgccgcctatcgcttctgccac
ggcaaccagttgcagaccggacgcctgctggggatcagccgcaacatcgtgcgcgcccgc
ctggagaagatcggcgagctggaaacctcgccacgacacaacgtggtctcgctggtgggc
aagtga

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