Pseudomonas aeruginosa UCBPP-PA14: PA14_47460
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Entry
PA14_47460 CDS
T00401
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pau
Pseudomonas aeruginosa UCBPP-PA14
Brite
KEGG Orthology (KO) [BR:
pau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pau03016
]
PA14_47460 (rnd)
Enzymes [BR:
pau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PA14_47460 (rnd)
Transfer RNA biogenesis [BR:
pau03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PA14_47460 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Ribosomal_L27_C
Motif
Other DBs
NCBI-ProteinID:
ABJ10482
UniProt:
A0A0H2Z8K1
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All DBs
Position
complement(4228143..4229267)
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AA seq
374 aa
AA seq
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MTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDP
LLIQDWSPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHSMG
YSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEEKRAW
LLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAVLRELCAWREEQARLRNRPRNHV
LRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAQAARLPQSEWPEALPEP
LPPEVTPLLKSLRAIGQREAETLGMAPELMLRKKILEALLKSGYPEGPYELPDSLRGWRR
ERMGQALLDALESA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcccgaaatccagtggatccgcgatgatgccagcctggcgcagcaatgccgg
gaatggcgcacacagccgtacctcgcgctcgataccgagttcatgcgcgtcgataccttc
tatcccgcggccggtctggtgcaggtgggcgatggccggcaggagtggctgatcgatccg
ctgctgatccaggactggagtcccttcgccgaactgctcgaagacgagcgggtggtgaag
gtgctgcacgcctgtagcgaagacctcgaggtgttcctgcgcctcaccggcagcctgccg
gtgccgctgttcgatacgcagttggccgccgcctatctcggtatggcccattcgatgggc
tattcgaagctggtgaaggaggtgctggacatcgacctgcccaaggacgagacccgttcc
gactggttgcaacggccgctcaccgagatgcagatgcgctacgccgccgacgacgtccag
cacctcgcccaggtctacctggccctggatgcgcggctgagcgaggagaaacgcgcctgg
ctgctggaggacggcgccgaactggtcgccaacctctgccgcgagagcgatccgcgcgag
gcctaccgcgaggtcaagctgggttggcggctgcgtccgcagcaactggcggtgctccgc
gaactctgcgcctggcgcgaggagcaggcacgcctgcgcaaccggccgcgcaaccacgtg
ctgcgcgaacgcaccctgtggccgctggcgcgcctgctgccgaagaacaagaccgacctg
gcggcgatcgaggacatgcatccgcgcaccgtgcgccaggacggcgacttcctcatcgaa
ctgatcgcccaggctgcgcgcctgccgcagagcgaatggcccgaggcgctgcccgagccg
ctgccgccggaggtcaccccgctgctcaagagcctgcgcgccatcggccagcgcgaagcg
gagaccctgggcatggcgcccgagctgatgctgcgcaagaagatcctcgaggcactgctc
aagagcggctatcccgaaggtccctacgaactgcccgattccctccgcggctggcgccgc
gaacgcatgggccaggccctgctggacgccctggagagcgcatga
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