Phragmites australis (common reed): 133883187
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Entry
133883187 CDS
T10575
Name
(RefSeq) two-component response regulator ORR25-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133883187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133883187
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
133883187
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
CdhC
Motif
Other DBs
NCBI-GeneID:
133883187
NCBI-ProteinID:
XP_062178401
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Position
10:6977554..6982374
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AA seq
720 aa
AA seq
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MDVGTFPAGMRVLAVDDDGVSLKIIAKQLRICKYDVTTAMCAETALEMLRERKGDNQLDL
VITDVHMPDMDGFKLLELIGLEMDIPVIMLSANDEKETMMKGIKHGACDYLVKPVHLEQI
RKIWVHVLKKSTSDPRNRMSGGNDDARQKLQPGGTEGEKDGANSTRKYSRKSRKDGDGPE
EDRKNTAQKRPRVRWSVQLHHKFVEVVNQIGMDRAVPKKILEMMNVDGLSRENIASHLQK
YRIYLKRFSEGTVRHSNLFAGEPEGYKWNPNDMNGLQSFKNHPEHGRYQPSPSFAGSSNS
SNPFPMMNSPSAFGSGHDLLPTQSVQLMNSERNLGIHLKDMGPVGHGGNLLKDAVPGSQQ
DASKFISPGNSYTNISNVQLNVQLSGTSKCFLSGPSGSSVANSSNSMAFNTSKSFPFGTS
GNSSANISNDSPPLAASISFPSSCSIKSYASILRGKLLGATRGIPFDADNTFGDIADGDM
LASSSHLPVQSPELVNQPSVQIQSSSADLFSKDVREAPQFAGLSNSSNSWKTAVPLKFPN
VGHKDGTSEGPLQENSLKIKQPSRFAASSGQMPTFGNECQNQMAALMKKTAPVVGFSDQM
ALFNLGSNINSTGMPNCNSALGSASSIRSSLPNLQMNNSVMPTQTLNGEGASGNLPEKDG
TVDQQAVSDQLNNINESRMGTSEAQNRVSGDSDDFFSDWLNQDFFNNGDAFMDGDWEFIP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcacgttcccggcggggatgcgcgtgctcgccgtcgacgatgacggcgtc
tccctcaagatcatcgcgaagcaactacgcatttgcaagtacgatgtgacaacagcaatg
tgcgcggagacagcactggagatgctcagggagaggaagggggacaaccagttggacctg
gtgatcaccgacgtgcacatgccggacatggatggcttcaagctcctggagctcatcgga
ctcgagatggatatcccagtcatcatgctatccgcgaacgatgagaaggagactatgatg
aaggggataaagcatggggcttgtgactatttggtgaagccagtgcaccttgagcagatt
aggaaaatatgggtgcatgttctgaagaagagtacctctgatccaaggaaccgaatgagc
ggtggcaacgatgatgctcgtcagaagttgcaacctgggggtactgagggtgagaaggat
ggtgcaaacagcaccaggaagtattcaaggaagagcagaaaggatggagatggccctgaa
gaggacaggaagaacacagcccagaagaggccacgggtccggtggtctgttcagctacac
cacaagtttgtggaggtcgtcaatcagattggcatggatagggctgttccgaagaagata
ctggaaatgatgaatgtggatggcctcagtagagagaatatcgcaagtcatctgcagaag
taccggatctacctgaaaaggttcagcgaaggcacagtcaggcactctaatctatttgct
ggtgaacctgaagggtacaaatggaaccccaacgacatgaatggactgcaaagtttcaag
aatcaccctgaacatggtagataccagccatccccatcctttgctggctcttcaaactca
agcaacccttttccaatgatgaattcaccatctgcatttggatcagggcacgatttgctg
cccactcagtcagttcagctcatgaactccgagagaaatttgggcattcatctgaaggac
atggggccagttggtcatggtggcaacctgctcaaggatgctgtgccaggatcacagcag
gatgcgagcaaattcatctctcctggcaactcctacacaaacatatcgaatgttcagctg
aatgttcagctgtctggtacaagcaaatgcttcctttccggtccttctggcagctccgtt
gctaattcatcaaatagcatggcgttcaacacaagcaaatctttcccttttggtacttct
ggcaattcatctgcaaacatctcaaatgacagcccaccattggccgcaagcatcagcttt
ccttcctcttgttctatcaaatcctatgcaagcatattacgtggcaagctgttgggagca
accagaggtattccttttgatgccgacaacacctttggagacatagcagatggtgatatg
ctggcttcttcaagtcatttaccagtgcagtctcctgagttggtgaaccagccttcggtt
cagatacagtcatcttctgctgacctattcagcaaagatgtcagagaggctccccaattt
gctggacttagcaactccagtaactcctggaaaactgctgtaccattgaagtttcctaat
gttggtcataaggatggaacatctgaaggtcccttgcaggagaacagcctcaaaatcaag
cagccctcaagatttgcagcctcatctggccagatgccaacctttggaaatgaatgtcag
aaccaaatggcagcactcatgaagaaaactgcaccagtggtaggtttcagtgaccagatg
gcactattcaacttaggaagcaacataaactctacggggatgccgaattgtaactctgct
ctgggtagtgcttcaagcatcaggtcttcattgcctaaccttcagatgaacaattctgtc
atgccaacccagacactgaatggtgagggtgcaagtggtaatctccctgagaaagatggc
acagttgatcagcaggctgttagtgatcaactgaataacatcaatgaatcccgcatggga
acaagcgaggcacagaatagggtgagtggtgactcggatgatttcttctctgactggctt
aatcaagatttcttcaataatggtgatgctttcatggatggggactgggagttcatccct
tga
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