KEGG   Phragmites australis (common reed): 133883215
Entry
133883215         CDS       T10575                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
paua  Phragmites australis (common reed)
Pathway
paua03083  Polycomb repressive complex
paua04120  Ubiquitin mediated proteolysis
paua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133883215
   04120 Ubiquitin mediated proteolysis
    133883215
  09126 Chromosome
   03083 Polycomb repressive complex
    133883215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133883215
   04121 Ubiquitin system [BR:paua04121]
    133883215
   03036 Chromosome and associated proteins [BR:paua03036]
    133883215
Membrane trafficking [BR:paua04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    133883215
Ubiquitin system [BR:paua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     133883215
   Cul7 complex
     133883215
Chromosome and associated proteins [BR:paua03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     133883215
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     133883215
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 133883215
NCBI-ProteinID: XP_062178437
LinkDB
Position
10:complement(4843988..4844834)
AA seq 178 aa
MASDGTDQGKGVTMITLISSDNESFEVPEEAANISQTIRHMIEDDCTDGGIPLPNVTATV
LAKVLEYCINHAAGKSSSAAANSETASSSNAASSSDKERLATFDKAFMDVVDLDMLYDLI
LAANYLEIKGLLDLACQKVADIIKGKTVEEIRKTFGIKNDFTSNEEEEIRRENQWAFE
NT seq 537 nt   +upstreamnt  +downstreamnt
atggcttccgacggcaccgaccaagggaagggcgtgaccatgatcacgctcatcagctcg
gacaacgagtcgttcgaggtgccggaggaggcggcgaacatatcacagaccatccgccac
atgatcgaggacgactgcaccgacggtggcatcccgctccccaacgtcaccgccacggtc
ctcgccaaggtcctcgagtactgcatcaaccacgctgccggaaagtcctcgagcgccgcc
gcgaactccgagacggcgagctcctctaacgcggcctcgagttccgacaaggagcgtctg
gcgaccttcgacaaggcgttcatggacgtcgttgacctggacatgttgtacgacctcatt
ctggccgccaactacctcgagatcaaggggctactggacctcgcttgccagaaggtcgcc
gacattatcaagggcaagacggtggaggagatcaggaagacgtttgggatcaagaacgac
ttcacgtccaacgaggaggaggagatccgcagggaaaaccaatgggccttcgagtag

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