Phragmites australis (common reed): 133883452
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Entry
133883452 CDS
T10575
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
paua Phragmites australis (common reed)
Pathway
paua04016
MAPK signaling pathway - plant
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
133883452
04075 Plant hormone signal transduction
133883452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133883452
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133883452
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
LRR_RPS2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
133883452
NCBI-ProteinID:
XP_062178766
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Position
10:complement(8355032..8358107)
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AA seq
638 aa
AA seq
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MSPFHGYQGDGSLGSAFFIGGGGVRPRKRVFASAAAAAGEAVKAVAKRQKRREEPSLDAL
PDECLFEVLRRVHGGRERCASACVSRRWLALLGSIRASEAVLVPAPSVPDLNQEYLGEDD
EADFMCDDGNRERTLEGKEATDARLTAAAVANALHGRLASVSVRGSHPLRGVTDTGLSAL
ARGCPALRSLALWDVPQVTDAGLAEIAAECHSLERLDITGCPLITDKGLIALAQGCPDLK
LLAIEACSGVANEGLKAIGRYCAKLQAVNIKNCTHVDDQGVSGLVCSATASLAKVRLQGL
SITDASLAVIGYYGKAITDLTLARLPAVGERGFWVMANALGLQKLRCMTVISCPGLTDLA
LASVAKFCPSLKLINLKKCSKISDGCLKEFAESAKLLENLQIEECNKVTLMGILAFLLNC
SPKFKDLSLVKCIGIKDVCSAPAQLPVCKSLRSLAIKDCPGFTDASLAVVGMICPQLENV
NLSGLGAVTDNGFLPLIKSSESELVNVDLNGCENLTDAAVSALVKAHGSSLAHLSLEGCS
KVTDASLFAISESCSQLAELDLSNCMVSDYGVAVLASAKQLKLRVLSLSGCLMVTQKSVP
FLGSMSSSLEGLNLQFNFIGNHNIASLEKQLWWCDILA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtttcacggctaccaaggtgatgggtctcttggctccgctttcttcatcggc
ggcggcggcgtccggccgaggaagcgcgtgttcgcgtcggcggccgctgctgcgggcgag
gccgtgaaggcggtggccaagaggcagaagcggagggaggagccgtccctggacgcgctc
cctgacgagtgcctcttcgaggtcctccgccgcgtgcatggcggccgcgagcggtgcgcg
tcggcctgcgtctcacgccgctggctcgcgctcctcggcagcatccgcgcgtccgaggcc
gtgctggtcccggcccccagcgtgccggacctcaatcaggagtacctcggcgaggacgac
gaggccgatttcatgtgcgacgacggcaaccgcgagaggaccctcgagggcaaggaggcc
acggacgctcgcctcacggcggcggcagtcgccaacgcgctccacggccgtcttgccagc
gtttccgtccgtgggagccacccgctgcgtggcgtcaccgacaccggcctctctgcgctc
gcccgtggttgcccggcgctccgttcacttgccttgtgggatgtaccgcaggtgacagat
gctgggctcgccgagatcgccgccgagtgccactcactggagcgccttgacatcactggc
tgccccctgatcactgacaagggcctcatcgcgctcgctcaagggtgcccggacttgaag
ttactggccatcgaggcatgctctggtgttgccaacgagggcctcaaggcaattgggcgg
tactgcgcaaagctgcaggcggttaacatcaagaattgcacacatgttgatgatcaggga
gtgtctggcctcgtctgctccgcgaccgcgtcattggccaaggtccggctccagggtttg
agcattactgatgcctctcttgcggtgattgggtactatgggaaggcgatcacagacctc
accctcgctcgccttcctgcagttggtgagagagggttttgggtgatggccaatgccctg
ggcctgcagaagctcagatgtatgactgtcatctcctgccctggactcacggatcttgct
cttgcatctgttgccaagttctgcccaagtttgaagcttattaacctcaaaaagtgcagc
aagatctcagatggttgtctcaaggaatttgcggaatcagcaaagcttctggagaatttg
cagattgaggaatgcaacaaggttactctcatgggcattcttgctttccttctcaactgc
agcccaaagtttaaggatctctctttggtcaagtgcattgggatcaaggacgtctgctct
gcacctgcacagcttccagtatgcaagtcgcttcgttccctggccatcaaggattgccca
ggtttcactgatgccagcttggccgtggtgggcatgatctgccctcaattggagaatgta
aatctgagtggtcttggtgcagttaccgacaatggcttccttccattgatcaagagttcc
gagagtgagctggtcaatgttgacttgaatggttgcgagaatctcacagatgcagctgtt
tctgccttggtgaaggcacatgggagttctcttgcacaccttagtcttgagggctgcagt
aaggtaactgatgctagcctgtttgccatttctgagagttgcagccagcttgccgagctt
gatctttcaaattgcatggtcagcgactatggtgttgcggtcctagcatcagcaaaacag
ctcaagctccgcgtcctttcattgtcgggatgtttgatggtcacccagaagagtgttcct
ttcttaggcagcatgtcttcatctttggagggactcaatcttcagttcaacttcattggc
aaccacaacattgcatcattggagaagcagctctggtggtgcgacatccttgcttag
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