Phragmites australis (common reed): 133883456
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Entry
133883456 CDS
T10575
Name
(RefSeq) transcription factor GAMYB-like
KO
K09422
transcription factor MYB, plant
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133883456
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
133883456
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
133883456
NCBI-ProteinID:
XP_062178772
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Position
10:8412153..8416600
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AA seq
521 aa
AA seq
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MVVKVEEEPALGAPEEDSPPLSPSDDEEDDVEETDSEGDGAGGGAPPLKKGPWTPEEDKR
LKEYVEAHGEGNWNQVQRNAGLNRCGKSCRLRWANHLRPDLKKGPFDDQEVDKIIQMHHS
WGNKWAKMAACLPGRTDNEIKNFWNTRLKRHQRADLPMYPEYLASRVSNEDISCHTPDET
HGLKRSNEFSLENILDFNELMKFTMIDYDNHMHDLPVSSLVIPRNPLKHHVSTGCIVSDY
NGNPEETENTICSIDFNCGMTKSQLAPLSSAIASGHPIFDGNPSTSGTIQKTELPSFQYS
SYDDYSNVWLCEGPSGPRIEQVDTFIQSPGSDFNSFKSESISSQNTDWLYAMVHKVDGLD
PINSHGFLEVSVPPLSYNQVSQSNAYPMRHSYSVLGDCELEGNYFDEIQASNSPSGLDAI
FPFSNYYPDAIFPSLEDTGMHDALEASFMNEGSLLPKEHSIFQSLSSIFDGDSSEEAKLS
TAGHVLDSPAWKSSSAKLLGRGKQEPALPRDGPNSRRLFER
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaaggtggaggaggagcccgcgctgggcgcgccggaggaggactcgccgccg
ctgtcgcctagcgacgacgaggaggacgatgtggaggagactgatagcgagggggatgga
gcgggaggcggcgcgcccccgctgaagaagggtccgtggacgcccgaggaggataagcgg
ctgaaggagtatgtggaggcgcacggcgaggggaactggaaccaggtgcagcggaacgcg
gggctcaaccgctgcggcaagagttgccgcctccgctgggccaaccacctcaggcccgac
ctcaagaaaggtcccttcgacgaccaagaggtggacaagattatccagatgcaccatagc
tgggggaacaagtgggcaaagatggcggcctgtttgccagggcgcacagataatgaaatt
aagaacttttggaataccagattgaagaggcatcaaagagctgatttgcctatgtatcca
gagtatttagcttctcgggtttccaatgaagacatcagctgtcacactcctgatgagaca
catggtctgaaacgatcaaatgagttctcactggaaaatattcttgattttaatgaacta
atgaagtttactatgatcgactatgataatcacatgcacgatctccctgtttcaagcctt
gtgattccgaggaaccctttgaaacatcatgtctctactggctgtatagtatcagactac
aatggcaatcctgaggagactgagaataccatttgttccatagatttcaactgtggaatg
acaaagagtcagttggcacctcttagtagtgccattgccagtggccatccaatattcgat
ggcaacccctctacttctgggaccatacagaagacagagcttccttcattccaatattcc
agctatgacgactatagtaatgtctggctgtgtgaaggcccctcgggtcctcgtattgaa
caggttgacaccttcattcaatccccagggtctgatttcaattcgttcaaatcagaatcc
atatcttcacagaacactgattggctgtatgcaatggttcacaaggttgatggattagac
cctataaactctcatggatttttggaagtgtctgttcctcctctttcatacaatcaagtg
tcacaatcaaatgcttaccctatgaggcattcctattcagttcttggtgattgtgaactt
gagggcaattattttgatgaaattcaagcttcaaattcaccttcgggtttggatgctatt
tttcctttcagcaattattatccggatgctatttttccatccttggaggataccgggatg
catgatgctttagaagcaagtttcatgaacgaaggatcactactcccaaaggagcactct
attttccaatcattgagttcaatctttgacggggattcttccgaggaggctaagctgtca
actgcaggtcatgtgcttgattcacccgcctggaaaagctcctcggccaagctccttggc
cgtggcaaacaggagccggcactgccacgtgacggtcctaattcccgtcgtttgtttgaa
cgctga
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