Phragmites australis (common reed): 133883483
Help
Entry
133883483 CDS
T10575
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133883483
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133883483
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133883483
microRNA pathway
RISC loading complex
133883483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133883483
NCBI-ProteinID:
XP_062178806
LinkDB
All DBs
Position
10:complement(8981677..8994570)
Genome browser
AA seq
964 aa
AA seq
DB search
MLEVLDMAPPPLPPSRCQQGAAKGGHGHAARRKQPLQSSVSQPKVETEAAAVVPPEGGKR
CGGGGGRRRGGRGRAKASGEPRVAPGSEQEQIPAPRAVIGPPVPSKGLSFCRRPGFGTVG
ARCVVKANHFLAELPDKDLTQYDVKITPEVCSRSVNRAIMAELVRLYRESDLGMRLPAYD
GRKNLYTAGALPFDAREFVVRLTDDNDGTGVPPREREYRVAIKFAARADLHHLRQFIAGR
QADAPQEALQVLDIVLRELGNQRYVAVGRSFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQ
MGLSLNIDMSSTAFIEPLPVIEFVAQILGKDVMSRPLSDANRIKIKKALRGVKVEVTHRG
NVRRKYRISGVTTQPTHELIFPIDDQMNMKSVVEYFKEMYGFTIQHPHLPCLQVGNQKKA
NYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPREQEMDILQTVHQNGYEQDPYAKE
FGINISEKLASVEARVLPAPWLKYHDNGKEKECLPQVGQWNMVNKKVINGCKVSHWACIN
FSRSVPEATARGFCQELAQMCQISGMEFNSEPVIPIYSARPDQVVKALKHVYNIALNRLK
GKELELLLVILPDNNGPLYGDIKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVK
MGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYA
GLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQKPLRIIFYRDGVSE
GQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSTDKSGNIL
PGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYA
RCTRSVSVVPPAYYAHLAAFRARFYMEPELSENQTTKSSNGTNGASVKPLPAVKEKVKRV
MFYC
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtcctggacatggcgccgccgccgctgccgccgtcgcggtgccagcagggg
gccgccaagggcgggcacggacacgcggcgaggaggaagcagccgctgcagagcagcgtg
tcgcagccgaaggtggagacggaggcggcggcagtcgtgccgccggagggaggcaagagg
tgcgggggcggcggagggaggaggcgcggcgggcgcgggcgggccaaggcgtctggggaa
ccgcgcgtggcgccggggtccgagcaggagcagattcccgctccacgcgccgtcattggg
ccgccagtgccgagcaagggactgtcgttctgccggaggccggggttcgggacggtgggc
gcgcgctgcgtcgtgaaggccaaccacttcctcgccgaactccccgacaaggacctcacc
cagtacgatgtcaagatcacgccggaggtttgttcgcggagcgtgaaccgggccatcatg
gcggagctggtccgcctataccgcgagtcagacctcgggatgcgcctcccggcctacgac
ggccgcaagaacctctacaccgccggggccctcccgttcgacgcgcgtgagttcgtggtg
cgcctcaccgacgacaacgacggcaccggcgtgcccccacgggagagggagtacagggtc
gccatcaagtttgccgcgcgcgccgacctccaccacctccgccagttcatcgccgggcgg
caggcggacgcgccgcaggaggccctccaggtccttgacatcgtgctccgggagctaggc
aatcagaggtacgtcgccgtagggcggtccttctactcgccggacattaggaagccgcag
cggctcggcgacggcctgcaatcgtggtgcgggttctaccagagcatccggccgactcag
atgggactgtcgcttaacatcgacatgtcgtccacggcgtttatcgagccgctgccggtg
atcgagttcgtggcccaaatattagggaaggatgtcatgtcaagaccattgtcagatgct
aaccgaatcaagatcaagaaagcactgcgaggtgtaaaagttgaagttactcaccgagga
aatgtaaggcggaagtatcgcatttcaggggtgacaacgcaaccaactcatgaactgatt
ttcccaattgatgatcaaatgaatatgaaatccgtcgtggagtacttcaaggaaatgtat
gggtttaccattcaacatccccatcttccatgccttcaggtgggaaaccaaaagaaagcg
aactatctaccaatggaggcctgcaagattgtcgagggccagagatacacaaagaggctg
aacgaaaaacagataacatcattgctaaaggttacatgccaaaggcctagagaacaggag
atggatattctacagacagttcatcaaaatggatatgagcaagatccatatgcaaaggaa
tttgggatcaacattagtgagaagctagcttctgttgaagcccgagtccttcctgcacct
tggttgaaatatcatgataatggaaaagagaaggagtgcttaccacaggttggtcaatgg
aacatggtaaacaagaaagtgatcaatggatgcaaggtgagccattgggcttgtataaac
ttctcgaggagcgtcccagaagccactgctcggggattttgccaggagttggcgcaaatg
tgccagatttcgggcatggaatttaacagtgagcccgtgataccaatatattcagctaga
ccagatcaagtagtgaaggcacttaaacatgtgtataatatagcattgaacagactcaag
ggtaaggaacttgaacttcttttggtaatcctccccgacaacaatggcccattatacggt
gacataaaacgcatctgtgagactgatttgggattgatatcacaatgttgcttaaccaag
catgtttttaagatcagcaagcagtacttggcaaatgtctcccttaaaattaatgttaag
atgggaggaagaaacactgtgctcctggatgcgataagttggaggattccattggtcagt
gacataccaactattatatttggtgcagatgtaacacatcctgagaccggggaggactca
agtccatcaattgctgctgttgttgcttctcaagattggcctgaagttacaaagtatgct
gggttggtttgtgctcaggctcatcggcaagagctcattcaggacctttacaagacatgg
catgatcctcagagaggcactgtaacaggaggcatgatcagggagctcttaatatccttt
aggaaggccactgggcagaagccattgagaataattttctacagggatggtgttagtgaa
ggtcagttctaccaagttctcctttatgagttggatgctatccgcaaggcatgtgcatcc
ctagaaccaaattaccagcctcctgtaacatttgtggtggttcaaaagcgtcatcataca
agactatttgcaaacaatcacaaagacagaagtagcacggacaagagtggaaatattttg
cctggaaccgttgttgattcgaagatatgccatccaacagagttcgatttctacctctgt
agtcatgctggaattcagggaacaagtaggccagctcactaccatgttctctgggatgag
aacaatttcacagcagatgaaatgcagacattgacaaacaacctctgctacacttatgca
cggtgcacacgctcggtttctgttgtcccgcctgcatactacgcgcacctggcagcgttc
cgagcccggttctatatggaaccagagctgtcggagaaccagacgacgaagagctccaat
gggaccaacggagcctcggtgaagcctctgcctgccgtgaaggagaaggtgaagagggtg
atgttctattgctga
DBGET
integrated database retrieval system
