KEGG   Phragmites australis (common reed): 133883504
Entry
133883504         CDS       T10575                                 
Name
(RefSeq) coatomer subunit beta'-2-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133883504
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133883504
Membrane trafficking [BR:paua04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    133883504
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   133883504
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_HPS5 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT140_1st NBCH_WD40 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Clathrin WD40_like TPR_1 TPR_2 HEAT_GCN1 TPR_GEMI5 WD_LRWD1 TPR_8
Other DBs
NCBI-GeneID: 133883504
NCBI-ProteinID: XP_062178834
LinkDB
Position
10:complement(9373025..9392957)
AA seq 908 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWIMSSLYSGSVCIWNYKTQTMVKSFEVSELPV
RSAKFIPRKQWVVAGADDTLIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKIWSLGSPDPNFT
LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE
LPIIMTGSEDGTIRLWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG
REEPVASMDSSGKIIWAKHNEIQTVNIKAVGADTEIADGERLPLSVKELGSCDLYPQSLR
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSTDGEYAVRESTSKIKIYSKTFQ
ERKSIRQAFSAERVYGGVLLAMCTNDFICFYDWAECRLIRRIDVNVKNVYWADSGDLVTI
ASDSSFYILKYNRDIVSSHLDGGGSVSEEGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVVSYTLLLSLVEYKTLVM
RGDFERANAVLPSIPKEQHNSVAHFLESRGMVEEALEIATDPNYRFDLAVQLGSLEVAKE
IAVEARSESKWKQLGELAMSAGKLEMAEECLLQATDLSGLLLLYSSLGDAEGITKLASMA
KEQGKNNVAFLCLFMLGKLEECLQLLVDSNRIPEAALMARSYLPSKVSDIASIWKKDLQK
VNCKAAESLADPAEYPNLFEDWQIALNVEATIAAKRGIYPPAEEYVTYAERSNESLVEAF
KSMNIQEEVPSENGDPAHEVIVDDVVEVEESQEDAVEVEADDSTDGVLVNGNDGEEHWGM
NNEENSSA
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgccgctccggttagagatcaagaggaagctcgcgcagaggtcggagagggtcaagtcc
gtggacctgcaccccaccgaaccatggatcatgtcaagtctttattctgggagcgtttgc
atctggaactacaagacgcagacaatggttaaatcatttgaagtcagcgagttaccagtt
cgttcggctaaatttattccgcgaaagcaatgggttgtagctggtgccgatgatacgtta
atccgtgtgtacaactataatacaatggataaggttaaggtgttcgaagctcacactgat
tacatcaggtgtgtggctgttcacccaaccctgccttatgtgttgtcatcatcagatgac
atgctgataaagctttgggactgggataagggctggatgtgcactcaaatctttgaggga
cactctcattatgtcatgcaagtcacatttaacccgaaggacaccaatacttttgccagt
gcttcccttgatcgtactgtaaagatctggagtcttggttctcctgacccgaacttcact
ttggacggtcattcaaagggtgtgaactgtgttgattacttcactggtggtgatcggcca
tatctaattacaggctctgacgatcaaactgcgaaggtttgggattaccaaacaaagagc
tgtgttcaaacacttgaagggcatgcccataatgtctctgctgtatgtttccatcccgag
cttccaataataatgacaggttccgaggatggaacgattcgcctatggcactccactacc
tacaggcttgagaacacacttaactatggccttgaacgagtttgggcattaggttatatg
aagggttcaagaagagttgtgattggatacgatgaagggacaataatgataaagattggc
cgtgaagaacctgttgctagcatggatagcagtggtaaaatcatatgggcgaagcataac
gaaattcaaactgtcaatataaaggcagttggtgcagatactgagattgcagatggagaa
cgcctgccactgtctgtgaaggagttaggaagttgcgatctttacccacaaagtttacgg
cacaatccaaatgggagatttgttgttgtatgcggagatggagagtatataatctacaca
gcgctagcatggagaaatagatcctttgggtcggctcttgaaattgtctggtcgaccgac
ggagaatatgctgttagggaaagcacttcaaaaataaagatctacagtaaaacttttcag
gagaggaaaagtataagacaagcattctccgcagaacgtgtatatgggggagtattgctt
gctatgtgtacgaacgacttcatttgtttctatgactgggcagagtgcaggttgatacgc
cgaattgatgttaatgtgaaaaatgtatattgggctgacagtggtgacttggtaacaatt
gcaagtgattcatcattctacattttgaagtacaatagggatatagtttcttctcatcta
gatggagggggttcagttagcgaggaaggtgtggaagatgcctttgaattgcttcatgag
ataaatgaacgtgtccgtactgggttatgggtcggagattgttttatatacaataactct
tcatggcggctaaattactgtgtgggaggagaggtaactacaatgtttcacttggaccgg
ccgatgtatttgttaggatatctcgctaaccaaagtcgtgtctatcttattgacaaggag
ttcaatgttgtgagctatactttactactcagtttggttgagtacaaaacactcgtgatg
cgtggagatttcgaacgtgcaaatgctgttttaccatccataccaaaggagcaacacaac
agtgtagcacatttccttgaatcacgtggcatggtagaggaagcccttgaaatagcgact
gaccctaattacagatttgacctggctgtgcagcttggtagtctggaagttgcaaaggaa
attgctgttgaggcacgaagtgagtcaaagtggaagcagttgggtgaattagctatgtcc
gctggaaagctcgagatggcagaggaatgtctgcttcaagctacagaccttagcggctta
ttgcttttatattcatcacttggagatgctgaagggataacaaaactagcatccatggct
aaagagcaaggaaagaacaatgttgcttttctttgtttgtttatgctgggcaaattggaa
gaatgccttcaattgttggttgatagcaaccgtattccagaagcagcattgatggcacga
tcctatcttccaagcaaagtttctgatattgcatcaatatggaaaaaggatcttcaaaag
gtgaactgcaaagctgcagaatctctggcagatcctgccgagtacccaaacctgtttgaa
gactggcagattgctctcaacgtggaagctaccattgctgccaaaaggggtatctatcca
cctgctgaggagtacgtaacttatgcggagaggtccaatgaaagccttgtggaagctttc
aaaagtatgaatatacaagaagaggtaccaagtgagaatggagatcctgctcatgaggtc
attgtggatgacgtagtcgaggtcgaggaaagtcaagaggatgcagttgaagttgaagcc
gatgattcaacagatggtgtccttgtgaacgggaatgatggtgaggaacactggggtatg
aacaatgaagaaaattcatcagcataa

DBGET integrated database retrieval system