KEGG   Phragmites australis (common reed): 133883567
Entry
133883567         CDS       T10575                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133883567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133883567
   03041 Spliceosome [BR:paua03041]
    133883567
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133883567
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133883567
Spliceosome [BR:paua03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133883567
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 133883567
NCBI-ProteinID: XP_062178901
LinkDB
Position
10:complement(10968289..10973088)
AA seq 406 aa
MAGYGENQDAMNGYEEEEEEEEVEEVEEEVDEEEVYEEEEEGHEEAGAAAAERRRGGGGG
EGLENGEAGGDEGRGADAGGGGASGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDK
HTRMPRGFGFVTFSDPSVIDRVLEDEHVIDGRTVEVKRTVPREEMSSKDSHGPKTRKIFV
GGIPPSLTEDKLKEHFSSYGKVAEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMH
DLGGKQVEIKKAEPKKPGGGDSSSNGRYSHGSGGYRGSHRGSGGGSGSGSSGSSGGSGYR
SGAAAYYGSTAYAGYGRGYGYGGNAGYGSGFGAGYGGSMYGGPYGAYGGYGSAYGGGAYG
APGGYGAGGYGAYGGARGYGAYGGAGGMGGGSTGGRGSSRYHPYGK
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcggggtacggtgagaaccaggacgcgatgaacggatacgaggaggaggaggaggag
gaagaggtggaggaggtcgaggaggaggtggacgaggaagaggtgtacgaggaggaagag
gaggggcacgaggaggctggggcggcggctgcggagaggaggagaggcggaggcggaggg
gagggcttagagaatggagaggccggtggcgacgaaggaaggggcgcggacgcagggggt
ggtggcgcatcggggaaaattttcgtagggggtgtagcctgggagaccactgaagaaaca
ttcactaagcatttccagaagtatggtgctataactgattctgtgatcatgaaggacaaa
catactaggatgccacgtggatttggatttgttacattttccgatccatctgtgattgac
agggttctggaggatgaacatgttatagatggaagaacggttgaagttaaaaggactgtc
ccaagagaggaaatgtcatcgaaagatagtcatggtcctaagacaagaaagatctttgtt
ggtggtattccaccatctctcactgaagataagctaaaggagcacttctcctcgtatggg
aaggtggctgagcatcagattatgcttgaccatagcactgggcgttcacgaggctttggc
ttcgttactttcgaaagtgaagatgctgttgaaagggttatgtcagagggaagaatgcat
gatcttggaggaaaacaggttgaaataaagaaagctgaaccaaagaaacctggtgggggt
gattcaagctctaatgggagatatagtcatgggagtggtggttaccgtggttctcaccgc
ggtagtggtggaggcagtggcagtggcagctctgggagcagcggtggtagtggctatcga
tcaggtgctgcagcctattatggtagcacggcctatgctggctatggcagagggtacgga
tatggaggtaatgctggctatgggtcaggttttggtgctggttatggtggttccatgtat
ggaggtccatatggtgcctacgggggatatggcagtgcctatggaggtggtgcatatggt
gcaccaggaggctatggtgcaggaggatatggtgcgtacggtggtgcaaggggatatggt
gcgtatggcggtgcaggaggaatgggtggtgggagcaccggtggccggggctcgagcaga
taccatccgtatggaaaatga

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