Phragmites australis (common reed): 133883738
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Entry
133883738 CDS
T10575
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133883738
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133883738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
Motif
Other DBs
NCBI-GeneID:
133883738
NCBI-ProteinID:
XP_062179139
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Position
10:complement(17521363..17540974)
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AA seq
729 aa
AA seq
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MPCHDASPPLLSPLPPSLNPRTPERAKSIAPLLRICTKSNEKERKRRKQLSNLAMDRSRS
KRGYHYDQDSTPPRSKPRFDRRSGGGQNPNSSYHRRGPPGGGVDSDRRGFLPPDAAPLPP
PRPPSSSAVAGAPGCGPAATTTTSFRILCPESKAYGFPPGFVAKVREDSGALVNVHPTFA
GDYVRVIETVDGARREADGRQPMFSPAQEALLTVHRRILETDADDGDEDGEYGPRGKDPR
DRGKTTTQLIVPRLHVGCLLGKGGKIIEQMRMETKTHIRILPRDQNTPRSVSLSEEVVQV
VGDGNNVKKAVVIISDRLKESLHRDRGPFRGRMNSPEHRISQEDEYLGGTQQMPAYEEPY
GRTDQIRNNSGMEPPGYEFDSNGSKVIEHPEFQYDDIVFRILCPNDKANSLVGTRDGIIE
VLQADVGIDVRLTDIVAGSDERVVLVTSREGPDHELFPAQEALLHIQTHIVDLGPDKDNI
ITTRLLVPSTEIAFFEGRDGSLSDIQRQTSANIQILPREDLPSGALESDELIQIVGEIRA
ARNALMQVTTKLRSYLYREMSGPIQVSNSNVHGSISPAIGSPRGPYQGNDLPMAAYHEAP
QLSTSWHSKDSGGSASGSFEQGSNINDDISRSTTKRFAVPLVTRSTLEVVIPRSAAASLT
MTAGSKLVQISEMSGATVMLAEDRPEVMEKVIRISGTPEQADKAQSLLQGFILSILYTIL
TGTSSSKLN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgccctgccatgacgcatctcctccactcctttccccgcttccgccatctctaaaccct
agaacgccggagcgcgccaaatcaatcgcgcccctgctcagaatctgtaccaaatcgaac
gagaaagaacgaaagcgaaggaaacaactctcgaatctggcaatggatcgctcccgctcg
aagcgcggctaccactacgaccaggactcgacgccgccccgctccaagccgcgcttcgac
cgccgaagcggcggcggccagaatcctaactccagctaccaccgccgcgggccccccggt
gggggcgtagactccgaccgccgcggcttcctcccccctgacgccgcgccgctcccgccg
cctcgtcccccttcttcgtcagccgtggcaggggcgccgggctgtggccccgccgcaacc
accaccacctccttccgcatcctgtgcccggagtccaaggcctacggcttcccgcccggc
ttcgtcgccaaggtccgggaggacagcggcgcgctcgtcaacgtccacccgaccttcgcg
ggtgactatgtccgggtcatcgagacggtcgacggcgcgcggcgcgaggcggacggccgc
cagcccatgttctccccggcccaggaggcgctcctcacggtgcaccgccggatccttgag
acggacgccgatgacggggacgaggacggcgagtacgggcccaggggaaaggacccccgg
gacagggggaagaccaccacgcagctcatcgtgccaaggctgcacgttggctgcctgctt
ggcaagggtgggaagatcatcgagcagatgaggatggagaccaagacgcacatcaggatc
ctgccgcgcgaccagaacaccccgcggagtgtgtccttgtcggaggaggttgtgcaggtt
gttggagatgggaataatgttaagaaggctgtagtaataatctctgatcgcctaaaggaa
agcttacaccgtgatcgtggtcccttccgtgggcggatgaattcaccagagcaccgcatt
tctcaggaagatgaatatttgggtggtactcagcagatgcctgcatatgaagaaccttat
gggcgaaccgatcagattaggaacaatagtggcatggagccaccaggatatgagtttgat
tcaaatggtagcaaggtcattgaacatccagagtttcagtatgatgatattgtattccga
attctttgcccaaatgacaaggctaacagtttagttggaacacgtgatggaataatagag
gtgctacaggcagatgttggcattgatgttagacttactgatattgttgctggttctgac
gaaagggtagtactcgtcacatccagagagggcccagaccatgagcttttcccagctcag
gaagcactgctgcacatccaaactcatattgtagaccttggccctgacaaggataacatt
atcacaacaagactacttgtaccttcaactgaaattgctttctttgagggaagggatgga
tcactatctgatatacagagacagactagtgcaaacatacagatattaccaagagaagat
cttccatctggcgctctagagtctgatgaactcatacagattgtcggagagattagagct
gctcggaatgctcttatgcaagtaactacgaaattaaggagttacctataccgtgagatg
tctggtcctattcaagttagcaacagtaatgtacatggatccatttctccagcaataggc
tcgcctcgaggaccataccagggaaatgatcttccaatggctgcttaccacgaagcacca
caactgtcaacttcatggcattcaaaggatagtggaggcagtgcaagtggatcatttgag
caaggtagcaacattaatgatgatatcagtcgaagtactacaaaacgatttgccgttcct
ctagtgactagaagcacattagaagttgtcataccaaggagtgctgctgcaagcctcacc
atgacggctggtagtaagctcgtccaaataagtgagatgtctggtgctactgtcatgctt
gctgaagatagacctgaagtcatggagaaagtaattcgaatatctggtacccctgagcag
gctgacaaagctcagagtttgctgcagggatttattcttagcattctttacactatattg
acagggacaagtagttccaaactgaactga
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