Phragmites australis (common reed): 133883840
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Entry
133883840 CDS
T10575
Name
(RefSeq) importin subunit beta-1-like
KO
K14293
importin subunit beta-1
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133883840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133883840
03036 Chromosome and associated proteins [BR:
paua03036
]
133883840
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133883840
Pre-60S particles
133883840
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133883840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IMB1
HEAT_EZ
HEAT
IBN_N
TPR_IPO5
HEAT_GCN1
HEAT_MROH2B_C
CEP104-like_TOG
MMS19_N
TPR_DNAAF5
PDS5
HEAT_Maestro
Vac14_Fab1_bd
HEAT_GCN1_C_2
TIP120
ARM_ARMC5
GNC1_N
Motif
Other DBs
NCBI-GeneID:
133883840
NCBI-ProteinID:
XP_062179206
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Position
11:complement(17723542..17728238)
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AA seq
868 aa
AA seq
DB search
MDITQILLAAQSPDANLRTVAEGNLTQFQEQNLPNFLLSLSVELSNDEKPPESRRLAGII
LKNSLDAKDSAKKELLTQQWVIVDPSIKLKIKESLLITLGSSVHDARHTSSQVIAKVASI
EIPRQEWQDLIAKLLGNMTSPGASAPLKQATLEALGYVCEEISPQHLEQDQVNAVLTAVV
QGMNHTELSPEVRLAAVKALYNALDFAESNFANEMERNYIMKVVCDTAVSKEVEIRQAAF
ECLVAIASTYYAHLDPYMQTIFNLTANAVKGDEEPVALQAIEFWSAICDEEIQLQDEYEG
SDDGNSTVHFRFIEKALSSLVPMLLETLLKQEEDQDQDDNVWNISMSGGTCLGLIARTVG
DAIVPLVMPFVEVNITKPDWHCREAATFAFGSILEGPSVEKLAPLVQAGLDFLLNTMNDP
NSQVKDTTAWTLGRVFELLHSPGSANPIINNANLPRIMTVLLESSKDVPNVAEKVCGAIY
FLAQGYEDAQSISSVLTPFLPNAIAALLSAADRADTTHFRLRASAYEALNEIVRASNIPE
TSVIIGQLLQEIMRRLNLTFDLHILSSGDKEKQSDLQALLCGVLQVIIQKLSSTDAMPII
AQTADQLMFLFLRVFACHSSTVHEEAMLAIGALAYATGQDFVKYMPDFFTYLEAGLQNYE
EYQVCSISVGVVGDICRALEDKVLPFCDRIMTVLLKDLSNSMLNRSVKPPIFSCFGDIAL
AIGENFEKYLPYAMPMLQGAAGLLGTLDQSDDDMVDYGNQLRRGIFEAYSGILQGIKGPK
AQLMVSYATLLLQFTEAVFKDRSRDESVTKAAVAVLGDLADTLGPSSKDLFKSNLFHVEF
LRECLDLDDEVRETASWAQGMINQALAS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggatatcactcagattctgctagcagctcaatctccggatgctaaccttcggacagta
gcagaaggcaacctcacgcagttccaggagcagaatctacctaacttcctcctttcctta
tcagtagagctctcgaatgatgaaaaacctccagagtccagaaggcttgctggtattatc
cttaagaattcattggatgcaaaggattctgccaaaaaggagctactgactcaacaatgg
gtcattgtggatccatctatcaaattgaagatcaaggagtcattgctcataacactagga
tcttcggtgcatgatgcaaggcatacctcatcacaagtcattgctaaggttgcatccatt
gagataccacgccaagaatggcaagacctcattgccaaattactggggaacatgacatcg
ccgggtgcatctgctcctttgaagcaagcaacgctagaggcattggggtatgtctgtgag
gagatttctccgcagcacttggagcaggatcaagtgaatgctgttcttactgctgtggtc
cagggaatgaaccatacagagctcagccctgaagttcgtcttgcagcagttaaagccctg
tataatgctcttgactttgctgagagtaacttcgcaaatgaaatggagagaaattatata
atgaaggtggtttgtgatactgcagtgtccaaagaagtggagatcagacaggccgccttt
gaatgccttgttgcaattgcatccacatattatgcacacttagatccttatatgcaaacc
atattcaacctgacagctaatgctgtgaaaggagatgaggaaccggttgcacttcaggct
atcgagttctggagcgctatttgtgatgaagagattcaactccaagatgaatatgaagga
tctgacgatggtaactctactgtacattttcgctttattgaaaaggccctctcttctctt
gttccgatgctgctagaaactctgttgaagcaagaggaagatcaagatcaggatgataat
gtatggaacatttccatgagtggtgggacgtgccttggactcattgccagaactgttggt
gatgcaattgtccctcttgtgatgccgtttgttgaggtcaacatcacaaagcctgattgg
cattgtcgtgaggcagctacctttgcatttggttctatccttgaaggcccctctgttgaa
aaacttgctccgctggtccaggctggtcttgatttcttgcttaatacaatgaatgatcca
aacagccaggtcaaagatactaccgcatggactcttgggagggtatttgagctcttgcat
tctccaggcagtgcaaatccaattataaataatgcaaaccttcctcgtatcatgactgtg
ttgcttgagagtagtaaagatgttccaaatgtggctgagaaagtctgtggagctatttat
tttcttgcccaaggttatgaagatgcacagtccatatcttctgtgctcacaccttttctc
ccgaatgccattgctgctcttctttctgctgcggatcgtgctgatacaacccatttcagg
ttacgtgcttctgcttatgaagcactgaatgagattgtgagagccagcaacatacctgaa
acttcagtcattataggccagttattgcaggagatcatgagacgattgaaccttacattt
gatctccatatactttcttctggtgacaaggagaagcaaagtgatctgcaggctttgctg
tgcggtgtactgcaggtcatcatccagaaactgagcagcacagatgcaatgcccataatt
gcccagactgctgatcagttgatgttcctgtttctgcgtgtctttgcttgccacagttcc
actgtacatgaagaagcaatgcttgcaattggtgctcttgcatatgctactggccaagat
tttgtgaaatacatgcctgacttcttcacatacctggaagctggcttgcagaactatgaa
gagtaccaagtgtgctccatctctgtaggggtggtgggtgatatttgccgtgccttggaa
gataaagttttgcccttctgtgatcggataatgaccgttcttctcaaggacctctcaaac
tctatgctcaatcgctctgtgaagcctccaattttctcatgctttggagacattgctctt
gctattggtgagaattttgagaaatacctgccatatgctatgccgatgcttcaaggagct
gcaggactcctcggtactcttgatcaaagtgatgatgatatggttgattatggtaaccag
ctcagacggggtatttttgaggcctactctggtatacttcagggtataaagggccctaaa
gctcagctgatggtatcttatgcaacccttctactgcagttcactgaagctgtcttcaaa
gataggagcagggatgagagtgtgacaaaggctgcagttgctgtccttggggatcttgcg
gacacccttggtccaagctcaaaggatctgttcaagagcaacctcttccatgttgagttc
ttgagggagtgccttgacttggatgatgaagttagggagactgcatcatgggcccaggga
atgataaaccaagcactggcttcgtaa
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