Phragmites australis (common reed): 133883903
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Entry
133883903 CDS
T10575
Name
(RefSeq) transcription factor IIIA-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133883903
03021 Transcription machinery [BR:
paua03021
]
133883903
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133883903
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
133883903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-H2C2_2
zf-met
CCAP
zf-C2H2_jaz
DUF7565
Motif
Other DBs
NCBI-GeneID:
133883903
NCBI-ProteinID:
XP_062179285
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All DBs
Position
11:1151751..1155817
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AA seq
382 aa
AA seq
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MGGRDPGAGEGEDTGGYSGESTAAAEAPSLRDIRRYKCEFCDVVRSKKSLIRAHVLQLHK
DEVGGLEYYQECGSSAPHKEVSHDCKECGMRFKKPAHLKQHMQSHSLERPFACHVDGCPF
SYSRKDHLNRHLLTHQGKLFACPIEGCNHKFSIKGNMQRHVQEIHKDGSPCKSKKEFICP
EVNCGKTFKYGSKLKKHEDSHVKLDYTEIVCCEPGCMKTFTNVECLKAHSQSCHRYVQCD
ICGTKQLKKNFKRHCRMHEGSCVNERIKCHFEDCKCSFSKKSNLDKHVKAVHEQHRPFVC
QFSGCGKKFSYKHVRDNHEKSSAHVYIEGDFVEADEQRPHSAGGRKRKPISVESLMRKRV
GAPDDAPAQDDATGYLRWLLSG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggcggccgggaccctggggcgggggaaggggaagataccggcgggtattccggggag
agcacggcggcggcggaggctccgtcgttgagggatataaggcggtacaagtgcgagttc
tgcgacgttgttcggtccaagaagagtttgatccgcgcccatgtcctccagcttcataag
gatgaagtgggtggcttggagtattaccaggaatgcggcagcagtgcaccacacaaggag
gtcagtcatgattgcaaggagtgtggcatgaggttcaagaagccagcccatctgaagcaa
catatgcagagccattcgcttgagaggccctttgcctgccatgtagatggttgccccttc
agctatagcaggaaggaccatttgaacagacatctacttactcatcaagggaaactattt
gcgtgccctatcgaagggtgcaaccataagttcagtatcaaaggtaatatgcagcgacat
gttcaggaaatccataaggatggttctccttgtaaaagcaagaaagaattcatttgtcca
gaggttaactgtgggaagactttcaaatatggttccaagttaaagaagcacgaggattca
catgtcaagctggactacacagaaattgtatgttgcgaaccaggctgcatgaaaactttt
acaaatgtggaatgcctcaaggcacatagccaatcttgtcatcgatatgttcagtgtgat
atctgtggcactaaacagctaaagaagaatttcaagcgccattgtcgaatgcatgaaggt
tcctgtgttaatgaaaggatcaagtgccacttcgaggactgcaaatgttcattttcaaag
aaatccaatttggacaagcatgttaaggcggtccatgagcagcaccgaccttttgtgtgc
caattctctggttgtggcaagaaattttcgtacaagcatgtaagggacaatcatgagaaa
tctagtgctcatgtgtacattgagggtgattttgtggaggctgatgagcaacgaccacat
tcagcaggggggcggaagaggaaacccatatctgttgagagtttgatgagaaaaagggta
ggggctcctgatgatgcgcctgctcaagatgatgcaactgggtatttgagatggcttctc
tcaggttga
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