Phragmites australis (common reed): 133883949
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Entry
133883949 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase hel2-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133883949
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133883949
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133883949
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
133883949
NCBI-ProteinID:
XP_062179340
LinkDB
All DBs
Position
11:complement(11833951..11840847)
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AA seq
856 aa
AA seq
DB search
MDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVMDDKRCCICKTHCASVFVTKAMGD
YTRVVADFSVFPTAVNEGKVVDYWYHEDTQAYFDDADHYRMIRAMCRLSCSVCDNAEDQV
TLAAQAKRRSKFRSIEQLKGHLFHVHRLYMCSLCLEGRKVFICEQKLYTRSQLTQHMKTG
DSEVDGSEVERSGFAGHPMCEFCKSSFYGDNELYTHMSREHYSCHICQRQHPGQYDYFRN
YDDLELHFRKDHFLCEDEACLAKKFVVFQSEAELKRHNAMEHGGRMSRAQRNAALQIPTS
FIYRRNEQDQRRGRGRGRNAYQDGSDGHISSAQNGRAINDDGPAGRVDNVTGSLQSLSVG
SSSGRADIGQSSRTGRVLEQLSFPPLSDPDIPDARVDSVPDETSFPSLSEQQSRYALALN
QSSRGAARLGDESLFPPLPGSSSNRGAASARQGLQSLAKSTLAARLQRSKGPVKVLHTAR
SRPSENPELLPSVSSSTQTWPTPDQGLLLPSSSQPRIGARPTRENGFISSNSAWNPGGPS
KMKHSVSTPNLVSGGSSGQALSSTAYGGNKNQEPPQSSQTPLVEDVRAANKSLVEKMRAA
LGMDEDRYSAFKEIAGEYRQGVIDTLEYLSYVEQFGLSHLVPEMARLLPDPRKQRELADA
YYTNIRFKSLQENGGGGTSSKEGNRKKKGKGKAPDVTESSAAKDVKDSLADSFLDSVRKL
QSNHHAQGEAEVLSRDGYRPAKGIQLSAGGSSSADVSLDRDTGSISKASGAKDNPGKGGG
NSSSNNSKQSKKTSKFLRARLGDNSLATLDLSHPSVSPEQSERESQGPQVPQMGLPVRGV
WKNGGGQKLFSSNGRK
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagctgcgcggtgtgcgcggacgcgttggagtgggtagcctacgggccttgc
gggcaccgcgaggtgtgctccacctgcgtcgtccgcctccgcttcgtgatggatgacaag
cgatgctgcatctgcaagacccattgcgcctccgtcttcgtcaccaaggccatgggcgat
tacactagagtggtcgctgatttctctgtgttccccactgcggtaaatgagggaaaggtg
gtggattactggtaccatgaggatacacaggcatacttcgatgatgccgaccactacagg
atgatacgggcaatgtgccggctttcatgtagcgtttgtgacaatgcggaggatcaggtt
actcttgctgctcaagcaaagcgcagaagcaagttcaggagcattgaacaattgaaggga
catttgttccatgtacataggttgtacatgtgcagtctttgcttggaggggaggaaggtg
tttatttgtgaacaaaagctttatacaaggtcacagttaactcaacatatgaaaactggg
gactctgaggtggatggctctgaggtagagcgcagtggttttgctgggcatccgatgtgt
gagttttgcaaaagctcattttatggagataatgagctttacacgcatatgtccagagaa
cactattcttgccacatatgccaaaggcagcatcctgggcagtatgactattttcggaac
tatgatgaccttgagttacattttcgaaaagatcattttctctgtgaagacgaagcatgt
ttggcgaagaagtttgttgtcttccagagtgaagcagagctcaagagacataatgcaatg
gagcatggtggtcggatgtctcgtgctcagaggaatgctgcacttcagatacctaccagt
tttatatatcgcagaaatgagcaagaccaacggcgtggaagaggtagggggcgtaatgct
taccaagatggatctgacggtcatatctcatctgcgcagaatggccgtgcaatcaatgac
gatggccctgcaggccgagttgataatgttacagggtctttacagtcattaagtgttggt
tctagttctgggcgagcagatattggccaaagctcaaggacaggacgggtgctcgaacaa
ttgtcctttcctcctctttcggacccagatattcctgatgctagagttgactctgttcct
gatgaaacctcatttccttcgttatcagagcagcaatcaaggtatgcactggccctcaat
cagagctcaaggggtgctgcaaggcttggggatgagtcattattccctcctttacctggg
tctagtagcaacaggggagctgcttcagcacgacaggggctacaaagtctagccaagagc
acacttgcagcaaggcttcaacgtagcaagggccctgtgaaagtactccatactgctcgg
tctcgtccctctgaaaatcctgaattgctcccttctgtttcaagttccacccagacatgg
cctacacctgatcaggggcttctcctgcctagttcttctcagcctcgaattggagctcgg
ccaacaagagaaaacgggttcatctccagtaactctgcatggaatcctggaggtccaagc
aagatgaagcactctgtttctactcctaatcttgtgtctggtggctcctctggccaagca
ttatcaagtacagcttatggtggcaataaaaaccaagaacctcctcaaagtagccaaact
cctcttgtagaggatgtccgtgctgcaaacaaatctctggttgaaaaaatgcgtgctgct
ttaggaatggatgaggataggtactctgcatttaaagagattgcgggtgaataccgtcaa
ggtgtcatagatactttagagtatctttcatatgttgagcagtttggactctcgcacctt
gttcctgagatggcaaggctattacctgatcctcggaaacagagggaacttgctgatgca
tattataccaacatacggtttaaaagcctccaagaaaatgggggaggtggaactagctcg
aaagagggcaaccgtaaaaagaagggaaagggaaaagctcctgatgttacagaaagtagc
gctgccaaggacgtgaaggattctctagcagatagctttctggacagtgtaagaaagctt
caatcaaaccaccatgctcaaggagaggctgaggtgctctcaagggatgggtatcgacct
gccaaggggattcagctatcagcgggaggttcatctagtgcagatgtgagtctagacaga
gatactggttccatttcaaaggcttctggtgccaaagataatccaggcaagggaggaggg
aatagcagcagtaacaacagtaaacaatcaaagaagacatcaaagtttctcagagctcgt
ctaggtgacaactcattggctacacttgatttaagtcaccctagtgtgagtcccgaacaa
tcagaaagggagtcacaaggcccacaagttccacagatggggttgcctgtgcgaggtgtt
tggaagaatggcggggggcagaaactcttctcaagcaatggaaggaagtaa
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