Phragmites australis (common reed): 133884128
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Entry
133884128 CDS
T10575
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133884128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133884128
04121 Ubiquitin system [BR:
paua04121
]
133884128
03036 Chromosome and associated proteins [BR:
paua03036
]
133884128
03400 DNA repair and recombination proteins [BR:
paua03400
]
133884128
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
133884128
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133884128
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
133884128
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
133884128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H_2
zf-HC5HC2H
BRCT_2
PTCB-BRCT
C1_2
Motif
Other DBs
NCBI-GeneID:
133884128
NCBI-ProteinID:
XP_062179479
LinkDB
All DBs
Position
11:complement(28616828..28620329)
Genome browser
AA seq
556 aa
AA seq
DB search
MVVDESNVSSSGAKLSSTRTHQHSYRESNVSRKRVMSEDIEGASELKRLPTPINLFEDEC
VFCHSFRTSQFHGPMVRYLKGRIVSMDEGNSSNGVYVHKNCLEWAPRVWFKDDIVMNLEM
EISRASKLRCSRCGLLGAALGCYYKCCDKSFHVPCAVQIFDCRWDDNSSVLCPEHVSKML
PCDELGSQTKENDNSSSLSKSQYSDKEGNFDDHQRENQQTDELNTSNSSSLPQSQCLHKE
GISREGQQIDHLNTSSSSSLPLGQHSDREGIYKNHERDDQQTNQFNTASTSSLPQVGHPD
EEGMSNACQNEEIKADELDTSSCPSNHWILLGSSLSASEKDSLQKFASWTNAMVTKEWAK
NVTHVIVGKNAGSTWSRSYEVLMGILFGKWVVQVEWIVDCLELRPGIEVSYEATFSDDSR
RSFDVPKKGRTRAAEGAPKLFSGLHFCLSAHMNPDDREHLQDLVAAAGGKILEGSDAHLL
RENLDDSSEKLYFIYDGGAPREFSSSSLLDLHKEVEEAKEHAASGAEVISHFRVLDAIAA
YDAQILNQRATPDLCA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtggtagatgaatcaaatgtctcatcatctggtgctaagctaagcagcaccagaact
catcagcattcctatagagaaagcaatgtgtctagaaaacgtgtcatgtctgaagacatt
gaaggtgcttctgagttgaagagattgcctactccaatcaacctttttgaagatgaatgt
gttttttgtcattcctttagaacaagtcagtttcatggtccaatggtacgttatctaaag
ggaagaattgtgtccatggacgagggcaactcatcaaatggcgtctatgtccataagaat
tgtctggagtgggctcctagagtatggtttaaggatgatattgttatgaacttggagatg
gaaatcagtcgtgcttcaaaattgagatgcagcagatgtggactcctgggagcagccctt
ggttgttattacaagtgttgcgataagagctttcatgttccatgtgcagttcagatattt
gattgccgatgggatgataatagttctgtgttgtgccctgaacacgtgtcaaagatgcta
ccatgtgatgagcttggctcacaaacgaaggaaaatgacaattcttcttccttgtctaaa
agccaatattcagacaaggaaggaaattttgatgatcatcaaagggaaaatcaacaaaca
gatgagcttaacacctcaaattcttcttcgttgcctcagagccaatgtttgcacaaagaa
ggaatctcaagggaaggccaacaaatagatcaccttaacacctcaagttcttcttccttg
ccactgggccaacattcggaccgcgaaggaatttataaaaatcatgaaagggatgatcaa
caaacaaatcagtttaacaccgcaagtacttcctccttgcctcaagtaggtcatccagac
gaagaaggaatgtccaatgcttgccaaaatgaagagataaaagcagatgagcttgacaca
tcaagctgcccttctaatcactggattttgcttggttcatctttaagtgcatcagagaag
gattccttgcagaaatttgctagttggaccaatgccatggtgaccaaagagtgggccaaa
aatgtgactcatgttattgtgggcaaaaatgctggtagtacgtggagtagatcgtatgaa
gtcctcatgggaatattatttgggaagtgggttgtccaagtcgaatggattgtggattgc
ttggaactgcgcccaggtatagaagtttcttatgaggcaacattcagtgatgattcacgc
agatcattcgatgtaccaaagaaaggaagaactcgagcagctgaaggggcaccgaaattg
ttttcgggattgcatttctgcctcagcgcccacatgaaccctgatgacagagagcacctg
caagatctcgtagcagccgccggagggaagatattggagggaagcgacgcgcatttgcta
cgcgaaaatttggacgattcttcggagaagctgtacttcatctacgacggcggcgctcca
agagaattcagctcgagttcgttgcttgatcttcacaaggaagtggaggaggcgaaagag
catgctgcgtccggggcggaggtgatcagccacttcagggtgttggatgccatcgctgcg
tatgatgcgcagattctgaatcagagggcgacccccgatctgtgtgcgtga
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