Phragmites australis (common reed): 133884200
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Entry
133884200 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133884200
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
133884200
Enzymes [BR:
paua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
133884200
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
133884200
NCBI-ProteinID:
XP_062179528
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Position
11:complement(34301557..34307105)
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AA seq
672 aa
AA seq
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MAAAASTRSLHILLKFAVAASLVQHLAAVAAPPDAARGVTLHVDRCQVVVDNGVVQVELS
RPQGHITGVRYNGGDQNMLQYNASQRNSGGYWNVVWNYPGSDHPKGIVDMLDGADFEVVS
SSVDQVELSFRSTYNPSRPSSVGLNVDKRLVMLRGSSGFYCYAIFEHAREWPALNISVAR
LAFKLNAAKFNYMAISDNIQRYMPSAADRDPPRGVPLAYKEAVLLVDPVEPEFKGEVDDK
YQYSLDNEDNMVHGWISSSNPMGFWVITPSNEFKNGGPIKRELTSHSGPTSLAVFLGPHY
IGKDIVVKFEEGEYWKKVLGPVFIYLNSIPKTKSGDLWEDAKAQAQAEVSKWPYSFPQSP
DFAKAGERGSITGRLWVRDRYMDKKDMQPAGMAYIGLASPGQPGSWATESKKYQFWTRAT
SGGRFSIGNVREGVYNLYAWVPGVLGDYMHTSPLTITPGRVISVGDLVFEPPRSGPTLWE
IGVPDRTAAEFYIPDPDPKYASRLFLTKDRYRQYGLWERYNVLYPAENDLVFTVGKSNHS
RDWFFAHVTRKVGNDMIMPTTWQIRFYLNGVVADGTYTLRIALAASHRSSLQVQVNGGTG
GGGGVFTSPELLGDNNAIARHGIRGTQWSLDLAIKGDMIHQGDNTIYITQTSALSELVGA
MYDYIRLEGPSP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggctgctagtactaggtccttgcacatcctgctcaagttcgccgtcgcagca
tccctagtacagcacctcgccgccgtcgccgccccgccagatgcagcccgtggtgtcacg
ttacacgtcgaccgttgccaggtggttgtggacaatggcgtggtgcaggtggagctgtcc
aggccgcagggccacatcaccggcgtccgctacaacggcggcgatcaaaatatgcttcag
tacaacgctagccagagaaactcgggagggtattggaatgtggtttggaactatcccggc
tctgatcacccaaaaggaatcgtggatatgttggacggtgcagatttcgaggtagtatcc
tcgagtgtagatcaggtggagctttctttcaggagcacatataatccatcacgtccaagc
agcgttgggctaaacgtcgacaagaggcttgtgatgctgagaggtagctcagggttctac
tgctatgccatctttgagcatgccagggagtggccagctctcaacatttcggtggctcgc
ctcgccttcaaacttaacgcggccaagttcaactacatggcgatttcagacaatatacag
agatacatgcccagtgcggcagacagagatccacctcgtggtgtcccactggcctacaag
gaggccgtcctgctggttgatcccgtggagccagagttcaaaggggaggtagatgacaag
taccagtactcgctggataacgaggacaacatggttcacggatggatcagcagcagcaac
ccgatgggcttctgggtcatcactcccagcaacgagttcaagaacggcggcccgatcaag
cgggagctcacctcgcacagtggccccacctccctcgcagtgtttctagggccgcattac
atcggcaaggacatcgtcgtcaagtttgaggagggcgagtactggaagaaagtgctgggc
ccggtcttcatctacctcaactccatccccaagaccaagagcggcgatctctgggaggac
gccaaagcgcaggcgcaggctgaggtcagcaaatggccctacagcttccctcagtcaccg
gactttgcgaaggccggcgagagaggctccattacagggaggctctgggtcagagacagg
tacatggacaagaaagatatgcagcctgctgggatggcttatatcgggctcgcctcacct
gggcaacctggctcctgggccacagagagcaagaagtatcagttctggacaagggccaca
tccggcggcaggttcagcatcggcaatgttcgggaaggagtgtacaacctgtacgcatgg
gtacccggggttcttggagactacatgcatacctctcctctaaccataacgccaggtcgc
gtcatcagcgttggtgatcttgtgttcgagcccccaagatcaggcccgacgctgtgggag
atcggtgtcccggatcggacggcggcggagttctacatccctgaccctgacccaaaatac
gcgagcaggctctttcttaccaaagacaggtatagacagtatggtttgtgggaaaggtac
aacgtcctgtaccctgcagaaaacgatcttgtattcacggttgggaagagcaaccactcc
agggactggttctttgcgcatgtcaccagaaaggtcggcaacgatatgatcatgccaacg
acatggcagatacggttctatctgaacggcgtcgtagcagacggcacctacacgcttcgc
attgcccttgcagcttctcacaggtccagcttgcaggtgcaagtgaacgggggaactgga
ggcggcggcggggtgtttacgtcgccggagttgctgggcgacaacaacgccatcgcccgg
cacggcatacgcggtacgcaatggagcctggacttggcgatcaagggagacatgatccac
caaggcgacaacaccatctacatcacccagacgagcgccttgagcgagctcgtcggggcc
atgtacgactacattcgccttgaagggccttccccatag
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