KEGG   Phragmites australis (common reed): 133884340
Entry
133884340         CDS       T10575                                 
Name
(RefSeq) F-box protein SKP2A-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
paua  Phragmites australis (common reed)
Pathway
paua04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133884340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:paua04121]
    133884340
Ubiquitin system [BR:paua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     133884340
SSDB
Motif
Pfam: LRR_SKP2 LRR_FBXL15 LRR_6 LRR_At5g56370 LRR_4 F-box-like LRR_14 LRR_8 F-box LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 133884340
NCBI-ProteinID: XP_062179691
LinkDB
Position
11:24555143..24560708
AA seq 371 aa
MVSGRPVNGELDAWFNSLMVSSSSERGQAESGGAMPTLSGWKDLPMELLLRIISIVGDDR
MVIVASGVCTGWRDALGWGVTNLTLSWCKQNMNNLMISLARKFTKLQVLTLRQNKPQLEN
SAVEAVANYCHDLRELDLSRSFRLSDRSLYALAHGCPRLTRLNISGCSNFSDTALTYLTC
RCKNLKCLNLCGCVKSATDRALQAIAQNCGQLQSLNLGWCEDVTDKGVTSLASGCPDLRA
LDLCGCVLITDESVVALANGCPHLRSLGLYYCQNITDRAMYSLANSRVKSKRERWDKVKD
EDGLANLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACALYRHR
AGRALLPNHAY
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggtcagcgggaggcccgtgaatggggaattggatgcatggttcaatagcctcatggtg
tcttctagcagcgagagggggcaggctgaaagtggtggtgcaatgcctacgttatcaggt
tggaaggatcttccaatggagttgctgctgcggattatatcaatagttggagatgatagg
atggtcattgttgcatctggtgtttgcactggctggcgtgatgcactgggatggggtgtc
actaatcttaccctctcatggtgcaagcagaacatgaataacttaatgatatcacttgct
cgcaagtttactaagttgcaagttctcactcttcggcaaaataaacctcagcttgaaaat
agtgcagtagaagctgttgccaactactgtcatgatctacgtgagttagacctcagcaga
agcttcaggctcagtgaccgctccttgtatgcattggcccatggatgcccacggcttaca
agactgaacatcagcgggtgttccaatttcagtgatactgccttgacttaccttacttgc
cgctgtaaaaacctgaagtgcttgaatttgtgtggatgcgtgaaatctgctacggacaga
gctttacaggccattgctcagaattgtgggcagctgcaatctttaaacctaggctggtgt
gaggatgtcacagataagggagtgaccagcttagcatcgggatgtcctgatctcagagct
ttagacttgtgcggttgtgttcttataacagatgagagcgtggttgctcttgccaacgga
tgtcctcaccttcgatctttaggcctgtactactgccagaacatcacagaccgtgccatg
tactccctcgcaaacagccgtgtgaagagcaagcgcgagaggtgggataaggtgaaggac
gaagacgggctcgcaaacctcaacatcagccaatgcacggccctgacgcctccggccgtg
caggcggtctgcgactccttcccggcgctccacacttgccctgggaggcactccctcatc
atcagcggctgcctcagcctgacgtccgtccactgcgcctgcgccctctaccggcaccgt
gctggaagagccctgttgcccaaccatgcttactag

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