Phragmites australis (common reed): 133884363
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Entry
133884363 CDS
T10575
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133884363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133884363
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133884363
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
DUF7885
F-box_5
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
133884363
NCBI-ProteinID:
XP_062179723
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Position
11:complement(3094047..3101683)
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AA seq
590 aa
AA seq
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MGRGGSRAAPAAAAPPWHALPDEVWEHAFSFLPAASDRGAAAGACRSWLRAERRSRRRLV
VANCYAAAPRDAVERFPAVRAAEVKGKPHFADFGLVPPAWGAAAAPWVAAAAAGWSLLEE
LSFKRMVVTDECLEMIAASFRNFQVLRLVSCEGFSTAGLAAIAAGCRNLRELDLQENEID
DCSIHWLSLFPESFTSLVTLNFSCLEGDVNITVLERLVTRCRNLKTLKLNNAIPLDKLAS
LLRKAPQIVELGTGRFSAEYHPDLFAKLEAAFAGCKSLRRLSGAWDAVPEYLPAFYCVCK
VLTSLNLSYATVRGPELIRFISRCKNLQLLWVMDLIEDRGLAVVASSCNKLQELRVFPSA
PFDAAEQVSLTERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCIIEP
HTPDYITHQPLDAGFSAIVESCKSLTRLSVSGLLTDRVFKSIGAHADRLEMLSIAFAGNS
DLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCSLTMGACRQLARK
MPRLSVEVMNDPRRACPLDSLTDESPVETLYVYRTIAGPRSDTPACVQIV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggcggctcgcgcgcggcccccgccgccgctgcgccgccgtggcacgcgctc
ccggacgaggtctgggagcacgccttctccttcctccctgcggcctcggaccgcggcgcc
gccgcgggcgcctgccgttcctggctccgtgccgagcgccgctcccgccgacgcctcgtc
gtcgccaactgctacgccgcagccccgcgcgacgcggtcgagcggttcccggccgtccgg
gccgcggaggtcaagggcaagccacacttcgcggacttcggcctcgtgccgcccgcgtgg
ggcgccgcggccgcgccctgggtcgccgccgccgccgccgggtggtcgctgctcgaggag
ctcagcttcaagcgcatggtcgtcaccgacgagtgcctcgagatgatcgcggcctccttc
aggaacttccaggtgctgcgcctcgtctcctgcgagggcttcagcaccgccgggctcgcc
gccattgccgccggctgcagaaatctaagagaacttgatctacaggagaatgagattgat
gattgttctattcattggctcagtctatttccagaatccttcacttctttggtaactcta
aatttttcatgtttagagggggatgtcaatattactgtacttgagcgactagtaaccaga
tgtcgcaacctcaagaccctcaagctcaacaatgctatccctcttgataagcttgctagc
ctccttcgtaaggctcctcagattgtagagctcggaacaggaagattctctgccgagtac
catccagatctctttgcaaagcttgaagcagcatttgctggttgtaaaagcctaagaagg
ctttctggggcttgggatgctgttccagagtacctgccagcattttattgtgtatgcaag
gtcctcacatcacttaatttgagttacgctactgtgcgaggccctgagctgataagattc
atcagcagatgcaaaaacttgcaactactatgggtgatggatttaattgaggaccgcggt
ctagctgttgtggcatcatcttgcaataaactgcaggagttgcgggtcttcccttctgct
ccttttgatgcagctgagcaggtttcattgactgaaagaggtcttgttgatgtctctgcc
agttgcccaatgttggagtcagtcctctacttctgcagacggatgaccaatgaggccctt
attaccattgcaaagaaccgccccaacttcacttgcttccgcctatgcatcattgagcct
cacactccagattacatcacgcaccagcctcttgatgcaggtttcagtgccattgtggaa
tcatgcaagagccttacacgtctatctgtctcgggccttctcacagatcgtgtatttaaa
tccatcggggcacatgctgatcgtcttgagatgctctcaatcgcctttgctgggaatagc
gacttgggtcttcattacatcctttcgggctgcaagagcttaaagaagctagagatcagg
gactgcccatttggtgataagcccttgctggcaaatgctgccaagctggagacaatgcga
tccctttggatgtcgtcgtgctcactgaccatgggcgcatgccgacagcttgcacgcaag
atgccccgccttagcgtggaggtcatgaatgatcctcgacgggcatgccccttggattca
cttacagatgaaagccctgtcgagacattgtatgtctaccggacaattgcgggtccaagg
tctgacacaccagcctgtgtccagattgtttag
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