Phragmites australis (common reed): 133884378
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Entry
133884378 CDS
T10575
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133884378
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133884378
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
RL
RBD_AKAP-17A
TGF_beta
P_C10
Motif
Other DBs
NCBI-GeneID:
133884378
NCBI-ProteinID:
XP_062179748
LinkDB
All DBs
Position
11:complement(25636658..25642783)
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AA seq
445 aa
AA seq
DB search
MAEPSKVIHIRNVGHEIAESDLLQLLQPFGVVSKIVMLRAKNQALLQMEDIHSSVSALQY
YSTVQPSVRGRNVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVL
HQVFKAYGLVEKIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYDGCCQLDIQYSNL
SELQVHYNNDRSRDFTNPSLPTEQRPRTSQQQGYPDPAGLYAFQQPGASYAQMGRAAMIA
AAFGGTLPPGVTGTNERCTLIVSNLNTDKIDEDKLFNLFSLYGNIVRIKILHNKPDHALV
EMADGLQAELAVHYLKGAILFGKKLEVNYSKYPNITPAPDAHDYLNSSLNRFNSNVVKNY
RHCCAPTKMIHISALPQEISEDAILTHVNEHGSVVNTKLFEVNGKRQALVLFETEEEATE
ALVSKHASSLEGNTIRISFSQMQSI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccttccaaggtaatccacatccggaacgtcgggcacgagattgccgagtct
gatctgcttcagctgcttcaaccgttcggggtggtctccaagatcgtcatgctgcgtgcc
aagaaccaggctcttctgcagatggaggacatacattcgtccgtgagcgcgctgcaatat
tacagcactgttcaacctagcgtaaggggaaggaatgtatacatgcaattctcatcgcac
caagaacttaccactgaccagagctctcatggaaggaattctgatcaggagtctgaaccc
aaccgaatcctcttagttactatccaccacatgatctatcctataacagtggaggttcta
catcaagttttcaaagcttatggacttgtggagaagattgtcacatttcaaaagtcagct
ggttttcaagcccttatccagtatcattcgcgccaagaagctgtggaagcatttggttct
ctgcatggaaggaacatatatgatggttgctgccagctagacattcaatattcaaatctc
agtgaactgcaagtccactacaacaatgatcggtctagggatttcacaaatccatcattg
cctacagaacaacgtccaaggacctctcagcagcaaggttatcccgatccagctggtctc
tatgccttccaacaacctggagcttcatatgcacagatgggaagggctgcaatgattgcg
gctgcatttggtggaactttacctcctggagtgactggtaccaatgaacggtgcacactc
atagtcagtaatttgaacactgataaaattgatgaggacaagcttttcaatttattttct
ttgtatggaaacatagtgcgaatcaagatattgcacaacaaaccagatcatgcccttgtt
gagatggctgatgggttgcaggctgagctagctgtgcattatcttaagggggctatacta
tttgggaagaaactggaagttaattactcaaagtaccccaacattactcctgcccctgat
gcgcatgactacttaaattcaagcctgaaccggtttaacagcaatgtggtcaagaactac
cgacattgctgtgctccaaccaagatgatccacatttctgctctcccacaagagatctct
gaggatgcaatccttactcatgtgaacgaacatggctctgttgtcaacacgaagctgttc
gaggtgaatggcaagaggcaggctcttgtcttgtttgagactgaagaggaggcaaccgag
gccctcgtatcgaagcacgctagctcgctcgaggggaacaccatccgaatctccttctcc
cagatgcagagtatatag
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