Phragmites australis (common reed): 133884453
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Entry
133884453 CDS
T10575
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133884453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133884453
Spliceosome [BR:
paua03041
]
Common components
Common spliceosomal components
SR proteins
133884453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
RRM_occluded
zf-CCHC_3
NdhO
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
133884453
NCBI-ProteinID:
XP_062179861
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All DBs
Position
11:1029082..1032519
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AA seq
315 aa
AA seq
DB search
MPRYDDRYGNTRLYVGRLSSRTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDA
QYNLDGREVDGSRIIVEFAKGVPRGSGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG
DWKNKCYRCGERGHIERNCQNSPRSLRRERSYSRSPTPRRGRGRSRSYSRSRSYSRSRSR
SLSGSPRGGRRAHDEKRSRSLSYSRSPRRSVSPPAKEKERSPTPDGSRSPMSPSPQDRVS
PPPKDNGERNGSDRGDSPVGRENSRSRSPSDGYRSPAANGSSPSPKGDHSPSPKDNGNNN
DDDDRRASPRGSESP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctacgatgatcgttatggaaacacacgcttgtatgttggtagactgtcctcc
cgcactcgttcccgtgacctagaataccttttcagcaaatacggaagaatacgagaagtg
gagttgaagcgcgactatgcgtttattgaattcagtgatcctcgtgatgctgatgacgcg
caatacaacctagatggcagggaggttgacgggagccgcattattgttgagtttgctaaa
ggggttccacgtggttcaggtggctcacgtgaatatatgggaagggggcctccgccagga
acaggccgttgttttaactgtggaattgatggtcactgggcaagagactgcaaggctggt
gactggaagaacaaatgttaccgctgtggagaaaggggtcatatcgaaagaaactgccag
aacagtccaaggagtctcaggcgtgagagaagttattcaaggtccccaactccacgccgt
ggacggggccgtagtcggagctacagccgaagccggagctacagccgatctagatccaga
tccctgtctgggtctcccaggggtggacgccgtgcccatgatgagaagagatcaaggagt
cttagctacagcaggagccccaggcgatccgtctcgccacctgcaaaggaaaaggagcgc
agccccacacctgatggtagtaggagcccaatgagtcccagcccccaggatcgggtgagc
ccaccaccaaaggacaatggtgagcgcaatggctcagaccgtggtgacagccctgtgggg
agggagaacagtcggagccggagcccatctgatggctaccgtagccctgcggccaatggg
agcagcccgagtcctaagggtgatcatagcccaagtcccaaggacaatggcaacaacaat
gatgatgatgaccgccgtgcttcaccaagaggaagcgaatccccctga
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