Phragmites australis (common reed): 133884458
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Entry
133884458 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133884458
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
HECT type E3
133884458
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
133884458
NCBI-ProteinID:
XP_062179868
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Position
11:complement(27486877..27496106)
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AA seq
1517 aa
AA seq
DB search
MESGSAPMDRCRKRPDSDPEGSGEPEPPADKRPCTAEPSISASAAVAPPPPSALAAEHGG
SDMDTSSSGHAGDADGDADDGDGDGDGDGGSSCESDGGGSPRPCGRGDGRFHRMVEAVAA
EGAGEGALVAALTELCEALSFCAEDAGGYFPTEAAARALVRLAGGGGDGAGASLDVMLLS
VRAITYLCDAMPRASDAVVRHGLLPVLCSRLLAIEYLDVAEQCLQAFEKISRRQPTQCLQ
AGMITAVLTYVDFFSSSIQRVVVSAVANVCKKVPADCSQFVIDSVPMLCNLLQSEDQMVV
EKVAACLISIVDSFGSSVDRLDQLCHQGVVEKVLPLINTGGLMTLSPSTCSNLIGLLAKL
ACTSLVAVKSLFELNVGSTIKGILVTSDLSHGILYLPLEKQNNQVVNEALKLANQLIPSA
ARDIEDTQIILAKEKIIMDEPRFLCQFSMDILPVLIKAVNSGANSYICYGCASIVNNICY
FSKPEMLQELLKETNISSFLAGLLSRKDHHVLTSSLKIIEILMEKLPDAYLGSFIKEGVV
YAVEALLTQEDCSKSTHLSDGSQQTETQPVRRNKSTCFCYAFDSRRSEAAETRTCRIGKD
TLLTFARHVKTTYFTKEVVSSEMGLTEILQKLKTCCAVLNETADKSSDQDNLQNEEHLST
ILSEVMMELHGGETMTTFEFLESGLVKSLSNYLSNGKYLQVEENMKCSADHFLAVVKRFQ
SFALMSFSRMDQHGGDMLLTLLVRKLQNALTSLDNFPVIMSHNFKPRSSISDIPTRHSTI
IPCIRVQFKKDEDEANLSSYDSAVNVEISSSLRTIEEFLWPKVSTDTNSQKAAKDEPQER
DCTPQSSPPSEGLICENQNSSVEPCSEQGTSSSGQAERNTATLSDHTLQPKLIFSLKGKE
LDRSVTLYQSILQDQINAGCDIILDTQFWRSVHDITFRTAVNPEANDSPKHFSTAITSID
DSATGFTWQMLPFFSSLLLGKLPCKLDRSSPSYDILFMLNILEGLNRYSFQLISDERNHS
FAHGRITNLNDLKAVASSIPQQEFVSAKLTDKLEQQMHDPLVLRSSCLPLWCTELMAACP
FLFSFEARWKYFQLTAFGSLTIHHGHMIDPSVNNITERGSPHSRKKFKVDRDDILVSAAK
MMKSHARSNSLLEVEYKEEVGTGLGPTMEFYTLISHEFQKSGLGMWRGELLCEAGTDDAH
VSRFVLAPNGLFPRPWSASADCASFQELNRRFHLLGQVVAKAIKDSRILDIPFSKAFYKL
ILGQELNIYDIQSFDPELATSLMEFQALACRKKYAESNLRRDCHIISDLSYRGCRIEDLA
IDFALPGYPEYVLSSECSDILSVENLEEYVHLVVEATVKSGIARQMEAFKSGFNEVFPLN
KLQVFSEDELERILCGEQDTWDFAQLVDHIKFDHGYTSSSPPVINLLEIIQEFGSHQRRA
FLQFITGSPRLPPGGLAALNPKFTVVRKHNNNKADHDLPSVMTCANYLKLPPYSSKERMR
EKLLYAITEGQGSFHLS
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgggagcgcgccgatggatcgctgccgaaagcggccggactccgaccccgag
ggctccggcgagcccgagccccccgccgataagcgcccgtgcacggcggaaccgtcgatc
tccgcctctgcggccgtcgctcctcccccgccgagcgcgcttgctgcggagcacggcggc
tcggatatggacacctcgtcgtccggacacgccggcgacgctgatggggacgcggatgac
ggggatggcgatggcgatggggatggggggtcgtcgtgcgagtcggatgggggcgggagc
ccgaggccgtgcggccgcggggacgggaggttccatcggatggtggaggcggtggccgcg
gagggcgcgggggagggcgcgctggtggcggcgctgacggagctctgcgaggcgctttcg
ttctgcgcggaggacgccggggggtacttccccacggaggcggccgcgcgggcgctggtg
cggctggccggcggcggtggcgatggggcgggggctagcctcgacgtgatgctgctctcc
gtgcgcgccatcacgtacctctgcgacgccatgcctcgcgcctccgacgccgtcgtccgc
cacggccttctccccgtgctctgctcccgcctcctcgccatcgagtacctcgatgttgct
gagcagtgtttgcaagcgtttgagaagatatcacggaggcagcctacacagtgcttgcaa
gcaggcatgatcactgctgtgctgacatacgttgacttcttctcttcaagtattcagagg
gttgtggtgtcagctgtcgcaaatgtctgcaagaaggtccccgcagattgctcccagttt
gtgattgattcagtcccaatgttgtgtaacctactgcagtctgaggaccagatggtagtg
gagaaggttgcagcttgcttgataagcatcgtggactcttttggcagttcagttgatcgt
ctcgaccagctctgtcaccagggcgtcgtagagaaggtccttcctttgatcaacactggt
ggactcatgacccttagcccatcgacttgcagtaacctgattgggcttctcgctaagcta
gcctgtacttcacttgtggcagtgaagtctctctttgagctgaatgttggtagcacgata
aaggggattttggtcacttcagacctctcccatggcattctatacttgcctttggaaaaa
caaaacaaccaggttgtcaacgaagctctgaaactagcaaaccagttgattccatcagca
gcaagagacattgaagacacccagatcatacttgcaaaagaaaaaataattatggatgaa
ccaaggttcttgtgtcagttctctatggatattcttcctgtcttgatcaaggcggtcaac
tctggtgccaattcatacatttgctacggctgtgcttcaattgtaaacaacatttgttac
ttcagtaaacctgaaatgcttcaagagttgctcaaggaaacgaacatatcaagcttcttg
gctggtttattgtctaggaaggatcatcacgtgctaacctcatcactaaagataatcgag
attctcatggaaaagcttcctgatgcttaccttggatcctttatcaaggaaggtgtagtc
tatgcagttgaggctcttcttacgcaagaggactgctcaaaatccactcatctgtctgat
ggctcgcaacaaacagagactcaacctgtcagaagaaataaatctacatgtttctgctat
gcatttgattcccgcagatctgaagctgccgaaacaaggacttgtaggattgggaaggac
actcttcttactttcgcaaggcatgtgaagacaacctactttactaaggaagtagtgagt
tctgagatggggttaacagagattttgcagaaactcaaaacttgctgcgcagttttgaat
gagaccgcagacaagtcatcagatcaagacaatctccaaaatgaagaacacttgtctacc
attttaagtgaggtgatgatggagctacatgggggagaaacaatgacaacctttgaattc
cttgagagtggattggtcaaatctttatcaaattacctctcaaacggcaagtacctccag
gtggaggaaaatatgaaatgcagtgctgaccattttttggctgtggtgaaaaggtttcag
tcatttgctctgatgtctttctcaagaatggatcaacacgggggtgatatgctcttgaca
ctgttagtaaggaagctgcagaatgctcttacttctcttgacaactttccagtgataatg
agccacaacttcaagccaaggagcagtatttctgatatccctacaaggcactcaacaatt
attccatgtatccgagtacaattcaagaaggatgaagatgaagcgaacttgtcaagctat
gatagtgctgtgaatgtggaaatatcatcctccttgcgtactattgaagaatttttatgg
cccaaagttagtacagatacaaacagtcagaaggctgctaaagatgagcctcaggagcga
gattgcacaccgcaatcatctcctccatcagagggcctgatttgtgaaaatcaaaattca
tctgtagaaccatgctcagagcaaggaacttcatcttctggtcaagcagaaagaaacact
gcgacattgagtgatcacaccttacaaccaaaactgatatttagtttaaaaggaaaagag
cttgatcgatctgttactctgtatcaatcaatcctgcaggatcagatcaatgcaggttgt
gacataattctggacacacaattttggcgcagtgtgcatgacataacttttagaacagct
gttaaccctgaagcaaatgattctcctaaacatttctctactgcaataacatcaatagat
gacagtgcaactggctttacatggcagatgctcccattcttttctagtctgttgcttggc
aaacttccttgcaaacttgacagatcaagtccatcatatgacatattatttatgttaaac
attttagagggattaaatcggtattcctttcaactcatctctgatgagagaaaccattct
tttgcccatggaaggataactaacctcaatgatctgaaggctgtagcttcctcgattcca
cagcaggagtttgtcagtgccaaattgacggataaactggagcaacaaatgcatgatcca
ttggttttaaggtcttcctgcctgcctttatggtgcactgaactgatggctgcatgccct
ttcttgttttcttttgaggcaagatggaagtatttccaactgacagcatttggttctttg
acaattcatcatggacatatgatagatccaagtgttaacaatataacagaaagggggtct
ccccactcgcggaagaagttcaaagttgatcgtgatgatatactggtttcagctgctaaa
atgatgaagtcgcatgctaggagcaattctctactcgaagtagagtataaagaggaagtg
ggcactggtttaggtcctacgatggaattctatacattgataagtcatgaatttcaaaag
tccggtctaggcatgtggagaggggagcttctttgcgaagctggtactgatgatgctcat
gtttctagattcgttctcgcccctaatggactgtttccaagaccatggtctgcttctgca
gactgtgcttccttccaagaattgaacagaagattccacctacttggtcaggttgtcgca
aaagcaattaaagacagcagaattcttgacattccattttctaaagcattctacaagctt
atattgggacaggagcttaatatttacgatatccagtcctttgatcctgaactggcaacg
tcccttatggagtttcaagcgcttgcttgtcgaaaaaaatatgcagaatcaaatttgaga
agggactgtcatattatatctgatttgtcttatcgaggttgtagaattgaggatcttgct
attgattttgctctcccagggtatccagaatatgtgctttcatcagagtgctctgacatt
ttgagtgttgagaatttagaagaatatgttcaccttgttgtcgaggcaacagttaaaagt
ggaattgcaagacagatggaggcttttaaatcaggattcaatgaggtatttccactgaac
aaactccaggttttctcagaggatgagctagagcgaatactctgtggtgaacaagatact
tgggattttgcgcaacttgtggatcacataaaatttgatcacggttacacttccagcagc
cctcctgtcattaatttgttggaaatcatacaagagtttggatctcatcagcgcagagct
ttcttgcaatttataacgggctcacctcggcttccaccaggcggcttggccgcattaaat
ccaaagttcactgttgtccgaaagcataacaacaacaaggctgaccatgacctgccgagt
gtgatgacttgtgccaactatcttaagttacctccatactcatcgaaggaaaggatgagg
gagaaactactctacgcaattacagaaggccaggggtccttccacctatcgtaa
DBGET
integrated database retrieval system
