Phragmites australis (common reed): 133884479
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Entry
133884479 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133884479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133884479
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133884479
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133884479
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
133884479
NCBI-ProteinID:
XP_062179893
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All DBs
Position
11:complement(8998924..9005036)
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AA seq
349 aa
AA seq
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MDMDSVECLSLPDASMDVDDVDGGHHPHPHHLGLPLHPAHLGASGGGAGAGRAYPKVNAG
TGAGAAGAVGTAGAGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRC
PTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAG
SECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFC
LHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVR
DSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDGACIPNLCS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacagcgtggagtgcctctccctccccgacgcctccatggacgtggatgac
gtcgacggcggccaccaccctcacccccaccacctcggcctcccgctccaccccgcccac
ctcggcgcctctggtggtggggctggcgcgggccgcgcttacccgaaggtgaatgccggg
accggcgccggcgcggcgggggcggtgggtacggcgggagcgggcgggcccccggcgacc
agcgtgcacgagctgctcgagtgccccgtctgcaccaactccatgttcccgcccatccac
cagtgccaaaatggacatacattatgttcgacatgcaaggccagagttcacaaccggtgc
cctacatgcagacaagagcttggtgatatcaggtgcttggcactggaaaaagtagctgag
tcactcgagcttccctgtaagtactgctctttaggttgcccagagatcttcccatactac
agcaagataaagcatgaggcacagtgcagcttcaggccgtataactgcccctatgctggc
tctgaatgtgctgtggctggtgatattccattccttgttgcacatttgagggatgatcac
aaagttgacatgcacagcggctgcacattcaatcatagatacgtcaaatccaacccgcga
gaggttgaaaacgccacgtggatgctaacagtatttcattgttttgggcagtacttctgc
ctgcattttgaggccttccagcttggaatggcaccggtttacatggctttcctccgtttc
atgggggatgagaatgaagcgaggaactatacatatagcctcgaggttggcggtaacggg
aggaaaatggtatgggaaggaactcctagaagcatccgtgatagccaccgcaaggtccga
gacagccatgacggcctcatcattcagaggaacatggcactgttcttctctggcggcgat
aggaaggagctgaagctgagggtgactggccggatctggaaggagcagaccaacccggat
ggggcctgcataccgaacctttgcagctga
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