Phragmites australis (common reed): 133884661
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Entry
133884661 CDS
T10575
Name
(RefSeq) protein argonaute 1B-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133884661
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133884661
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133884661
microRNA pathway
RISC loading complex
133884661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133884661
NCBI-ProteinID:
XP_062180141
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Position
11:complement(280107..287231)
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AA seq
1133 aa
AA seq
DB search
MNKNQQRHPIQVGSIAAALRPAAGQERVESEALGFGSRRQTAPPRPDGILVWVASARDVC
ITCILSTASIMVRKKRTGPGSSGEPSGASSGQGSSQRSERTQQHVGGRGSVPQQGARGGG
QHQGRGGYQGRGGPPSQHPGGGPPEYHPHEYQGRGGPRPRGGGVPQPYYGGHRGGSVGRS
IPPGPSRSVPELHQAPYVQYQAPAVSQPPSGAGSSSQPAAEVTTGQVQQQFQQLAIRGQG
STSQDIQMAPASSKSVRFPLRPGKGTYGDRCVVKANHFFAELPDKDLHQYDVSITPEVTS
RGVNRAVMGELVRLYRKSHLDGHLPAYDGRKSLYTAGPLPFTSRTFELTLHDEEDSIGGA
QGGQRRERVFRVVIKFAARADLHHLAMFLSGRQADAPQEALQVLDIVLRELPTARYSPVG
RSFYSPNLGRRQRLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLL
NRDISVRPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELSFPVDDRGT
VKTVVQYFLETYGFSIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITNL
LKVTCQRPQERELDILQTVHHNAYHEDPYAQEFGIRIDERLASVEARVLPPPRLKYHDSG
REKDVLPRVGQWNMTNKKMVNGGRVSNWACINFSRNVQDSAARGFCHELAIMCQISGMDF
ALEPVLPPVTVRPEHVERALKARYQDAMKILRPQGRELDLLIVILPDNNGSLYGDLKRIC
ETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTII
FGADVTHPHPGEDSSSSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQKG
TVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQ
PPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQ
GTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM
EPDTSDSGSMASGAATSRGPPPGGARSGRVTGNVAVRALPALKENVKRVMFYC
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatcagcaacgccacccaatccaggtaggctccattgcagcagcactgcgg
ccggcggcagggcaggagcgagtggagtcggaggccctagggtttggttcccggagacag
accgcccctccccgtcccgatggtattctggtgtgggttgcaagtgcccgcgatgtttgc
atcacgtgcattctttctactgcgtccatcatggtgaggaagaaaagaactggccctggt
agctctggtgagccttcaggagcgtcttctggacagggttcctcacagcgatctgagaga
actcaacagcatgtgggaggacgtggctcggtgccgcaacagggtgcccgtggtggcggg
caacaccaaggccgtggtggatatcagggccgtggaggtccaccttcacaacatccaggt
ggtgggccacctgagtatcacccgcacgagtaccagggacgtggtggtccacgccccaga
ggagggggagtgccgcagccatactatggcgggcataggggaggtagtgttggaagaagt
attcctccaggtccatcaagatcagttcccgagctgcaccaagccccatatgtccaatat
caagccccagcagtatcacaacctccatcgggagctggctcatcctctcagcctgcggca
gaggtgaccactggacaagtccagcaacagtttcagcaacttgcaattcgtggtcaaggt
tcaaccagccaagacattcagatggcaccagcatcaagcaaatcagttagattcccgctg
cgccctggcaagggtacttatggggacaggtgtgtcgtgaaggctaatcatttctttgct
gagctgcctgacaaagaccttcaccaatacgatgtatctataacgcctgaggttacttca
cgtggtgtcaaccgtgctgtcatgggagagcttgtaaggctttacagaaaatcccatttg
gatgggcatctacctgcatatgatggaaggaagagcctttatacagctggacctttgcca
tttacttctaggacatttgaacttactctgcacgatgaggaagatagtattggtggtgcc
caaggaggtcaaaggcgcgagagagtatttagggtggtgatcaaatttgctgcccgtgct
gatctccatcatttggccatgtttctatctggaaggcaagcagatgctcctcaagaggct
cttcaagtgcttgacattgtactacgtgaattgcctactgccaggtattctcctgttggt
agatcattttattctcccaacttagggaggcgccagcgacttggtgagggtttggaaagt
tggcgtggtttctaccaaagcataaggcctacacagatgggcctttcactgaatattgat
atgtcctctactgcatttattgagcctctccctgtgattgatttcgttgctcagcttctt
aatagagatatctcagttagaccattgtctgattctgatcgtgtgaagataaaaaaagcc
ctacgaggtgtgaaagtcgaggtcacgcaccgaggaaacatgcgcaggaaatatcgtata
tctggtctcacttcacaagcaacaagggagttatcattccctgttgatgatcgtggtact
gtgaagactgtggtgcaatactttctagagacttatggtttcagtattcagcacaccact
ttaccttgcttgcaagtgggcaatcagcaaagaccaaattatctgcctatggaggtctgc
aagatagttgagggacagcgttactcaaaacgactcaatgagaaacagatcactaattta
ctgaaagtcacttgccagcgtcctcaagagcgtgagctggacatcttgcagactgtgcat
cacaatgcataccacgaagatccatatgcacaggaatttggcataagaattgatgagcgt
cttgcatccgttgaagctcgtgttttgcctcccccaaggcttaaataccatgatagtggc
agagagaaggatgtgttgcccagagttggccagtggaacatgacaaacaagaaaatggtc
aacggtggcagagtcagcaactgggcatgcattaacttctcacgaaatgtgcaagatagt
gctgccaggggtttctgtcatgagctggctatcatgtgccagatatctggaatggacttt
gcacttgaacctgtgctacccccagtgactgtgaggcctgaacatgttgaaagagcacta
aaggcgcgttatcaagatgcaatgaagatactcagaccacagggcagagaacttgacctg
ctgattgtaatactgcctgacaataatggttctctttatggggatctcaaaaggatatgc
gagactgatcttggattggtttcccagtgttgtctgactaaacatgttttcaagatgagc
aagcagtatcttgcaaatgttgcccttaaaataaatgtgaaggttgggggaaggaatact
gtacttgtagatgctttgacaaggagaatcccacttgtcagtgacagaccaactattata
tttggtgctgatgttacccatccccatcctggagaagattccagttcttccattgccgct
gtggttgcttctcaagactggcctgaggtcaccaagtatgctgggttagtgagtgcccaa
gctcatcgccaagagttgatacaggatcttttcaaagtatggcaagatccccaaaagggg
actgtcactggtggcatgatcaaggaacttcttatttctttcaagagggcaactggacag
aaaccccaaaggatcatattctacagggatggcgtcagtgagggacagttctatcaagtt
ttgttgtttgaacttgatgccatcagaaaggcatgtgcatctttggaacccaactaccag
cctccagttacttttgtcgtggtccagaagcggcatcacactaggttgtttgctaataac
cacaatgatcagcgtactgttgatagaagtggaaacatactgcctggcactgtggtggat
tcaaagatttgccatccaactgaatttgatttctacctgtgtagccatgctggcattcag
ggaacaagccgccctgctcattatcatgttctgtgggatgagaacaaatttactgccgac
gagttgcaaactctcaccaacaacttgtgctacacgtatgctaggtgcacccgctcagta
tcaattgtgcctcctgcatactatgctcatctggcagccttccgagctcggttttacatg
gagccagatacctctgacagtgggtcaatggccagcggtgccgcgacgagccgtggccct
ccaccaggtggtgcacgcagcggcagggttaccgggaatgttgctgtgagggcgctacct
gctctcaaggaaaatgtgaagcgtgtcatgttttactgctaa
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