Phragmites australis (common reed): 133884681
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Entry
133884681 CDS
T10575
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
paua03110
]
133884681
Chaperones and folding catalysts [BR:
paua03110
]
Heat shock proteins
HSP100
133884681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_18
AAA_14
bpMoxR
nSTAND3
AAA_7
IstB_IS21
ATPase_2
AAA_28
TniB
TsaE
NACHT
NBD_SMAX1
DUF815
Zeta_toxin
RNA_helicase
AAA_19
Mg_chelatase
DNA_pol3_delta2
ResIII
DUF2987
AAA_25
T2SSE
ABC_tran
DASH_Spc19
DUF87
DUF4426
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
133884681
NCBI-ProteinID:
XP_062180177
LinkDB
All DBs
Position
11:complement(30567954..30571626)
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AA seq
913 aa
AA seq
DB search
MNPDNFTHKTNEALVAAHEMASEAGHAQLTPLHLAASLAADKAGLLRQAITQASGGDGAA
GDSFERVLSNALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL
EDSQISDCLKEAGVSAARVRTELEKLRGGEGRRVESASGDTNFQALKTYGRDLVEQAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVADTISILRGLKEKY
EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRIQLEVELHALEKEKDKASKARLADVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ
RREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEGETGENLMLTETVGPEQIAE
VVSRWTGIPVTRLGQNDKERLVGLAGRLHQRVVGQGEAVNAVAEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEE
GGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
NLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVARL
QMKDVAVRLAERGIALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQEE
IDENCTVYIDTTPAKDELAYKVDRSGGLVNAETGQKSDILIEVPNGAARSDAAQTVKKMR
IMEDEDEDGMDEE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggacaacttcacgcacaagacgaacgaggcgctggtggcggcgcacgagatg
gcgtcggaggccggccacgcgcagctcacgccgctgcacctggcggcgtcgctggcggcg
gacaaggcgggcctcctgcggcaggccatcacccaggcgtcggggggcgacggggcagcg
ggggactcgttcgagcgcgtgctgagcaacgcgctcaagaagctgccgtcgcagtccccg
ccgccggactcggtcccggcgtccacggcgctgatcaaggtcatccgccgcgcgcagtcc
gctcagaagaagcgcggcgactcccatctcgccgtcgaccagctcctactcggcctcctc
gaggactcgcagatctccgactgcctcaaggaggccggcgtgtccgcggcgcgggtgcgc
accgagctcgagaagctacgcggcggggaaggccgccgagtggagtccgcgtccggcgac
actaatttccaggcgctcaagacgtatggccgcgacctcgtcgagcaggccgggaagctg
gaccccgtcatcggccgcgacgaggagatccgccgcgtggtgcgcatcctctcccgccgc
accaagaataaccccgtcctcatcggcgagcccggcgtgggcaagacggccgtcgtggag
ggcctcgcgcagcgcatcgtgcgcggtgacgtgcccagcaacctcctcgacgtccgcctc
attgcactcgacatgggtgcgctcgtcgcgggcgccaagtaccgcggcgagttcgaggag
cggctcaaggccgtgctcaaggaggtggaggaggccgaggggaaggtcatcctcttcatc
gacgagattcacctcgtcctcggcgcgggcaggacggaagggtccatggacgcggccaac
ctgttcaagccaatgctcgcgagaggccagctccggtgcatcggcgccacaacgcttgag
gagtaccgcaagtacgtcgagaaggacgccgcgttcgagaggcggttccagcaggtgttc
gtcgccgagccgagcgtcgccgacaccatcagcatactgagagggctgaaggagaagtac
gaggggcaccatggtgtgaggatccaggaccgcgccctcgtcgtcgccgcgcagctctcc
gcgagatacatcatgggtcggcaccttccggacaaagccatagacttggttgacgaggcc
tgcgcgaatgtgagggtgcagctcgacagccagccggaggagattgataacctcgagagg
aagaggattcagctggaagttgagctccacgcgctcgagaaggagaaggacaaagccagc
aaggcccggttggctgacgtcaagaaagaattggacgatctgagggacaagctgcagcca
ctgacaatgaagtacaggaaggagaaagagaggatcgacgagatcaggaagctgaagcag
cgccgcgaggagctgcagttcaccctgcaggaagccgagcgccggatggacctggcccgc
gtggccgacctcaagtacggcgccctccaggagatcgacgccgcgatcgccaaactcgag
ggcgagacaggggagaacctgatgctcactgaaactgtaggccctgaacaaattgcagag
gtggtgagccgatggactggcattccggtgacccgactcgggcagaacgataaagagagg
ctggttggcctggctggcaggctgcaccagagggtggtcgggcagggagaggctgtgaac
gccgttgcagaggcggtgttgaggtcgagggctggtcttggccggccacagcagcccacc
ggctccttcctcttcctgggtccgactggtgtaggcaagaccgagctcgctaaggccctc
gccgagcagctgttcgacgacgagaacctgcttgtccgcattgacatgtctgagtacatg
gagcagcactcggttgcccgactgatcggagcaccacctggctatgttggtcatgaggaa
ggtgggcagctgactgagcaagtgaggaggaggccatacagtgtgatcctcttcgatgaa
gtcgagaaggcgcacgtcgcagtgttcaacaccctgctccaggttctcgacgatggaagg
ctcacagacgggcaaggcaggacggtggacttcaggaacaccgtgatcatcatgacatcg
aacctcggcgcagagcaccttcttgccgggatggtgggcaagaactccatgaaggtcgca
cgcgatcttgtcatgcaggaggtgaggaggcatttccgccctgagctgctgaaccggctc
gacgagatcgtgatattcgatcctctgtcccatgagcaactaaggaaggttgctcgcctt
cagatgaaggacgtggccgtccgtcttgccgaaaggggcattgctcttgccgtgaccgac
gctgcactggatgtcatcttatctttgtcttacgatccggtctacggcgcgaggcccatc
aggagatggatcgagaagagggtggtgacccagctgtccaagatgctgatccaggaggag
atcgacgagaactgcacggtgtacatcgacaccacgcccgcgaaggacgagctggcctac
aaggtggacaggagcggtgggctggtgaacgcggagacgggccagaagtcggacatcctg
atcgaggtcccgaacggcgcggccaggagcgacgccgcgcagaccgtgaagaagatgagg
atcatggaggacgaggacgaggacggcatggacgaagagtag
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