Phragmites australis (common reed): 133884750
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Entry
133884750 CDS
T10575
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133884750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133884750
03110 Chaperones and folding catalysts [BR:
paua03110
]
133884750
03029 Mitochondrial biogenesis [BR:
paua03029
]
133884750
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133884750
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133884750
Messenger RNA biogenesis [BR:
paua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133884750
Chaperones and folding catalysts [BR:
paua03110
]
Heat shock proteins
HSP60 / Chaperonin
133884750
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133884750
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133884750
Exosomal proteins of other body fluids (saliva and urine)
133884750
Exosomal proteins of breast cancer cells
133884750
Exosomal proteins of colorectal cancer cells
133884750
Exosomal proteins of bladder cancer cells
133884750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ATP-synt_DE
Motif
Other DBs
NCBI-GeneID:
133884750
NCBI-ProteinID:
XP_062180277
LinkDB
All DBs
Position
11:complement(31352136..31356688)
Genome browser
AA seq
578 aa
AA seq
DB search
MYRAAAAAISRSSSALRKQLAWGGGGEERLWARGYASKEVTFGVGARAAMLQGVNDLADA
VKVTMGPKGRTVIIEGSGKGPKVTKDGVTVAKSVEFEGSAKNVGANLVKQVAEATNKAAG
DGTTCATVLTQAILTEGCKAVAAGVNVMDLRNGINKAIHAITAHLKSKAWKINSTEEINQ
VATISANGEKEIGDLISKAMEKVGKDGVITIVDGKTLDNELEAVQGMKLSRGYISPYFVT
DQKTQKCEMEDPLILIHDKKISNMNSLLPVLEISIKNRRPLLIVAEDVEGEALAMLVLNK
HRAGLKVCAVKAPGFGDNRRVNLDDMAVLTGGEVLSEEQGLDLGKVQLQMLGTAKKVTVS
LDDTIILDGGGDKQQIEERCQQLRESIDKSTAMFDKEKAQERLSKLSGGVAVLKIGGASE
VEVGEKKDRVTDALNAARAAVEEGIVPGGGVALLYATKELDKISAANEDEKIGIQIIKNA
LKAPLKTIAANAGVDGAMVTGKLIEQEDLSLGYDATRGEYVDMIKAGIIDPVKVIRTALQ
DAASVSLLMTTTEAAIAELPATKARIASRMPQMSGMDF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgggcggcggcggcggccatttcgaggtcctcctcggcgctgcggaagcagctc
gcgtggggtggcggcggggaggagcggctgtgggctcgggggtatgcgtcgaaggaggtg
accttcggcgtcggcgcccgcgccgccatgctgcagggcgtcaacgatctcgccgacgcc
gtcaaggtcaccatgggccccaaggggcgcactgtgattatcgaggggtccggtaaaggt
cccaaggtcacgaaggatggggtcactgtcgcgaaaagcgtggagttcgagggtagtgct
aagaatgttggggcgaacctggttaagcaggttgctgaagctacgaataaggctgcaggg
gatggtaccacttgtgcaactgtacttacacaagcaattctcacggaaggatgcaaggcc
gtggcagcaggggtcaatgttatggacttgcgcaatggtataaacaaggccatacatgct
atcactgcccacctcaaaagtaaagcgtggaagataaattccacagaagaaattaaccag
gtagcaaccatttcagctaatggtgaaaaggaaattggagatttgatatcaaaagctatg
gaaaaagttggaaaggatggagtcattactattgttgatggcaaaacactggacaatgag
cttgaagcagtacagggaatgaagctgtctagaggctacatatctccttactttgtgact
gatcagaagactcagaagtgtgagatggaggatcctctgattcttatccatgacaagaaa
atctcaaacatgaattcactccttccagtactagaaatttccatcaagaatcgcaggcct
cttctcattgttgctgaggatgtagaaggagaagctcttgcgatgcttgtactgaacaag
catcgcgctggactcaaggtatgtgctgtcaaagctcctggatttggtgataacagaagg
gtcaatctggatgatatggctgtgttgactggaggagaggtactcagcgaggaacaaggt
cttgatcttggcaaagtccaactacagatgcttggcactgctaaaaaggttaccgtatct
cttgatgatactatcatcctagatggtggaggtgacaaacagcagatagaggagaggtgt
caacagcttagagaatcaattgacaaaagcactgctatgttcgacaaagaaaaggctcaa
gagcgtttatcaaagttatctggaggtgttgctgtcctcaagattggtggagctagcgaa
gttgaagttggtgagaaaaaagatagggtaacagatgctctaaatgctgcaagggctgct
gtggaggagggtattgtgccaggtggtggagttgcccttttatatgccaccaaggagctc
gacaagattagcgcagcaaatgaggatgaaaagataggaattcaaattatcaagaatgct
ttgaaggctcccttgaagaccatagctgcaaatgctggtgttgatggggccatggtcact
gggaagttaattgaacaagaggatcttagtttgggctatgacgcaaccagaggggagtat
gttgacatgattaaggctggcatcatcgatcctgtgaaagttatccgtactgcacttcaa
gatgctgcaagtgtttcgttgctgatgacaaccacagaggctgcaattgctgagctcccg
gcgacaaaagccagaatagccagccgtatgccgcaaatgagcgggatggatttttga
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