Phragmites australis (common reed): 133884783
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Entry
133884783 CDS
T10575
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133884783
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133884783
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133884783
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133884783
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Helicases
133884783
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
133884783
NCBI-ProteinID:
XP_062180317
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All DBs
Position
11:24622798..24627103
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AA seq
593 aa
AA seq
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MPTAKSASAQEEGREGLFASCSFSDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQ
HMLVKAATGTGKTLAYLAPIVQHLQMREPRVERTHGTFALVLVPTRELCLQVYGIAQQLV
HRFHWIVPGYVMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYSNLRWIVFDE
ADSILELGFGKAVEDILEHLGSRNGAPDQSKNKAEHMQRQNLLLSATLNEKVNRLAKISL
KNPVMIGLDEKPSGKSSTLGNSHTSLLSDDEEDEILEKQNDLVEQAVDDFNLPAQLIQRY
VKVSCGSRLAVLLTILKSLFERQVSQKVVVFLSTCVSVDFHHTVLSQLEWSPGLQLDTEK
KQKFLSCKVFRLHGNMDQDDRKKSFLGFGSEKSAILVSTDIAARGLDFPKVKCIIQYDSP
GEASEYVHRVGRTARIGEKGEALLFLQPVEIDYLKDLELHGASLTEYLFQKVLDSFPVNG
QKPHKRKQISLDMHPWIMSLQRSLESFVAAEAETKKLARDAFCSWVRAYTAHRGELKKIF
MVKKLHLGHVARSFGLKEQPSLVGRSHQVQLKKRKKEQKRERPAKRRKLPSKK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgctaagtccgcctctgcgcaggaggaggggagagaggggttgttcgcgtca
tgctccttctccgacctcggcctccaccctaccctctgcgcccacctccaagataagatg
ggtttccaagcaccaacccgaattcaagctcaggcaattccggttgccatgtcaggacag
cacatgctagttaaggcagcaactggaactgggaaaacactcgcataccttgcacccatt
gttcaacatctccagatgagagagcctcgtgtcgagagaactcatggaacttttgcgttg
gtacttgtgccaacgcgagagctatgcttgcaggtttacgggattgcacagcagttggtt
catcgttttcactggattgtccctgggtatgtcatgggtggtgagaacagagcaaaagag
aaagcaagactgcggaaaggaatatctattctcattgctactcctgggcgccttctggac
catttacagcatacttcgtcatttgtttattcaaatttgcgctggatagtttttgatgaa
gctgacagcattcttgaacttggtttcggaaaagcagttgaggatatactggagcacttg
ggttcaaggaatggcgctcccgatcaaagtaaaaataaagcagaacatatgcaaaggcag
aaccttctcttatctgctactcttaatgaaaaggtgaaccggttagccaaaattagtttg
aagaacccagtgatgattggccttgatgagaagccttcggggaaatccagtacgctgggg
aacagtcatacttctctattatctgatgatgaagaggacgaaatactggaaaagcaaaat
gatttagtggaacaagcggttgatgatttcaatcttcctgcacaattgatccaaagatat
gttaaagtttcatgtggttcaaggcttgcagttcttcttacgattctcaaatctctattt
gaaagacaagtctcccagaaggttgttgttttcttgtcaacctgtgtctcggttgatttc
caccatacagtactcagccagcttgagtggagtcctggcctgcaacttgatacggagaaa
aagcaaaagtttcttagctgtaaagtgttccgtttgcatggtaacatggaccaggatgat
cgcaagaagtcatttttgggatttggttctgaaaaatctgcaattcttgtatctaccgat
attgctgctaggggcttggactttccaaaagtgaagtgcatcatacagtatgattctccg
ggggaagcttctgaatatgttcacagggttggaagaacagcaaggattggtgaaaagggg
gaggccctcctgtttctacaacctgttgaaatcgactacttgaaagatctagagctacat
ggtgcatcactgacagaatatctctttcaaaaggttttggatagttttcctgtaaatgga
cagaagcctcacaaaagaaagcaaatatctttagatatgcatccttggataatgtctctg
cagagatcgctagaaagtttcgtcgcagcggaggctgaaacaaagaagcttgccagggat
gccttctgttcctgggttcgtgcctacactgcccaccgaggtgaactcaagaagattttt
atggtgaagaagctccacctgggacatgtagcaaggagcttcggtttgaaggagcagccc
tcgttggttgggaggtcacaccaggtgcaactcaagaagaggaagaaagagcagaagcgt
gaacgacccgccaagaggagaaagctaccctctaagaagtga
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