KEGG   Phragmites australis (common reed): 133884806
Entry
133884806         CDS       T10575                                 
Name
(RefSeq) small ribosomal subunit protein RACK1z-like
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
paua  Phragmites australis (common reed)
Pathway
paua03010  Ribosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    133884806
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133884806
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133884806
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     133884806
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   133884806
  Exosomal proteins of colorectal cancer cells
   133884806
  Exosomal proteins of bladder cancer cells
   133884806
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st DSE1_N WD40_MABP1-WDR62_2nd WDR55 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_Aladin ASA1 Beta-prop_WDR41 TRM82_WD Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st PAC11 CFAP251_N Beta-prop_NWD2_C eIF2A PROPPIN Beta-prop_ACSF4 WD40_RFWD3 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_pof12 Cytochrom_D1 Tricorn_2nd
Other DBs
NCBI-GeneID: 133884806
NCBI-ProteinID: XP_062180350
LinkDB
Position
11:complement(31960095..31962433)
AA seq 332 aa
MAGAQETLTLAGTMHGHNGEVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVHANNDSTT
EYGIPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGLTTRRFVGHSKDVIS
VAFSVDNRQIVSASRDKTIKLWNTLGECKYTIGGDQGGGEGHNGWVSCVSFSPNTNQPTV
VSGSWDRTVKVWNLTNCKLRCTLTGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLVEGK
RLYSLDAGSIIHSLCFSPNRYWLCAATQDSVKIWDLESKHVVQDLKPDIQISKNQILYCT
SLSWSADGSTLYTGYTDGSIRVWKISGFSYAV
NT seq 999 nt   +upstreamnt  +downstreamnt
atggccggcgcgcaggagacgctcaccctagcgggcacgatgcacggccacaacggtgag
gtgacggcgatcgcgaccccgatcgacaactccccgttcatcgtctcctcctcccgcgac
aagtcgttgctggtgtgggacctcaccaaccccgtccacgccaacaacgactccaccacc
gagtatggcatccccttccgccgcctcaccggccactcccacttcgtccaggacgtcgtc
ctcagctccgacggccagtttgcgctctccggctcctgggacggcgagctccgcctctgg
gatctctccaccggcctcaccacccgccgcttcgtcggccacagtaaggacgtcatctcc
gtcgccttctctgtcgacaaccgccagatcgtctccgcgtcccgcgacaagaccatcaaa
ctctggaacaccctcggggagtgcaagtacaccatcggcggcgaccagggcggcggcgag
ggccacaacgggtgggtctcctgcgtcagtttctcccccaacaccaaccagcccaccgtt
gtctccggctcctgggaccgcaccgtcaaggtatggaaccttaccaactgcaagctgcgc
tgcacgctcactggccacggcggctatgtcaatgccgtcgccgtgagccccgacggctcg
ctgtgcgcctccggcgggaaggatggtgttacgctgctgtgggatttggttgagggaaag
aggctgtactcactggacgctggctccatcatccactccctctgcttctcgcccaaccgg
tactggctctgcgctgcgacgcaggactctgtcaagatctgggacctcgagtcgaagcac
gtcgtgcaggatctcaagcccgacatccagatctccaagaaccagattctgtactgcaca
agcttgagctggagtgcggatggaagcacgctctacactggttacactgatgggtctatc
agggtctggaagatctctgggttcagttacgcagtctag

DBGET integrated database retrieval system