KEGG   Phragmites australis (common reed): 133884854
Entry
133884854         CDS       T10575                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133884854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133884854
Spliceosome [BR:paua03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133884854
 Complex B
    133884854
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 HATPase_c
Other DBs
NCBI-GeneID: 133884854
NCBI-ProteinID: XP_062180415
LinkDB
Position
11:32637447..32640127
AA seq 312 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP
GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE
QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL
RRKLYGHSSSRRYHGGRSRSPSPHHRRGHRDRDDYHRDRDDYRGGGGGRDDYRGGGGGRD
DYRGGGGGRGRGSRHDRYDDGGGRGSRPDRYDDGGRRRHGSPPRRARSPVRESSEERRAK
IEQWNREREARQ
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcagagcacttggcttcgatctttggcactgagaaggatagggtcaactgcccgttt
tacttcaagattggggcttgtcgtcatggggatcgctgctctcgtctgcacaacaggcca
accatatctccaactcttgtgcttgctaacatgtatcagcgccctgatatgataacccct
ggtgttgatgctcaaggccaacctattgatcctgagaagatgcaggagcattttgaggac
ttttacgaagacatctatgaggaactgggcaagtttggtgagattgagaacctgaacgtc
tgcgataaccttgctgaccacatgatagggaatgtctatgtccagttcagggaggaagaa
caggcagctgcagcatacaatgctcttcagggccgcttttactccggtcgcccgataatt
gtggagtattctcctgtgaccgacttccgtgaagcaacctgtaggcagtttgaggagaac
agctgcaaccgtggtggctactgtaatttcatgcatgtgaagcagataggcagggatctc
aggaggaagctctatgggcattccagttccaggaggtatcatggggggagaagccgcagc
ccaagcccacaccacaggaggggccatcgtgatcgcgatgactaccaccgggaccgtgat
gattaccgtgggggtggtggtggacgtgatgattaccgtgggggtggtggtggacgtgat
gactaccgtgggggtggtggtggacggggtagaggcagcagacatgacaggtatgatgat
ggagggggtagaggcagcaggcctgacaggtatgacgatggaggaaggcgcaggcatggt
agccccccaaggcgtgcaaggagcccagtcagggaaagcagcgaggagcgcagggccaag
atcgaacaatggaaccgtgaacgggaggcaaggcagtga

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