Phragmites australis (common reed): 133884872
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Entry
133884872 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133884872
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133884872
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133884872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
133884872
NCBI-ProteinID:
XP_062180434
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All DBs
Position
11:32791140..32796422
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AA seq
821 aa
AA seq
DB search
MGKAKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVA
VNHAPVGAFVVGVDLVPIRPIRGAYSLTEDITTTKCRASVRRLMDSNGVAAFDVVLHDGS
PNVGGAWAQEATSQSALVIDALRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQFFEKVE
ATKPTASRSTSAEIYIICLRYKAPAKIQPELLDIKHLFSVVPEKNKPRDPLNDRQKRHRD
GYDEGNTTLRKVGLASNFIWSEAQTPLEFLGSYNAISFDDPASLDIKNHELTTDEIKNLC
EDLFLLDKNGFKHILKWRIRLRRALSSSSQVTPKTDDAAENTKINDDGQLLQEMEELTSV
IDRKKKREKKRQSKRRAKDKARKATGMQIDATGDNYGDPDLFSISAIKGGKELQAVESAE
LNVEDGIGDSEDEGIQAPEDSDEEMDSDEEQQRYDAQLEEMLDEAYERFVTKKGGEVKQE
RKRAKRINPDADADLLEGGEDDGDDFEMDQGFDEDQDQETNPLLLSLDEQKPTKEQIIEQ
WYSQDVFTEAGTGVAEQSDSEDEREKLQRNSKKIDTGKKEKLVRAQRLKQDDFEIVPAEP
VRTEDDSSSSSDESDEPEEDLDDVSKAEVLAYAKKMLRKKQREQILDDAYNRYVFDDEGL
PTWFLEDEKRHRQPMKPVTREEVAAMKAMFKEIDARPAKKVAEAKARKKRVAMRQLDKAR
QKADAVADQNDINELSKRKMIDRIYRKAMPKKPQKEYVVAKKGVEVRAGKGKVLVDPRMK
KDKRARGTGKKGKKGGKSAKGKGSQKGMRGKAGKKTGKSPR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggcaaaagggaagcagcggcaggacaagttctaccacctcgccaaggagcag
gggtaccggagccgtgcggccttcaagctgctccagctcgacgctcgcttccgcttcctt
ccgacggctcgtgcggtgctcgacctctgcgccgccccgggagggtgggtccaggtggcc
gtcaaccatgcccccgtgggagccttcgtcgtcggcgtcgacctcgtgcccatccgccca
atccgcggcgcctactcgctcaccgaggacatcaccaccaccaagtgccgcgcctcggta
cggaggctgatggactccaacggcgtcgccgccttcgacgtcgttctccatgacggctcc
cccaacgtcggcggtgcctgggcgcaggaggccacatcgcagtcggcgctcgttatcgac
gccctacgcctcgctaccatgttcctcgcccccaagggcgcgttcatcaccaaggttttt
aggtctcaagattacaacgctattatgtactgtcttaaacagttttttgagaaggttgag
gcaactaaacctacagcaagtcggtctacctctgctgaaatttatatcatctgtctgaga
tataaagctcccgcaaagattcaaccagaacttcttgatataaagcacttgttcagtgtg
gttccagaaaagaacaagcctagggatcctctgaatgataggcagaagaggcaccgtgat
gggtatgacgaagggaatacaacattgcggaaagtcggtttggcatcgaactttatatgg
tccgaggcccagacgccgctggagtttttgggttcctacaatgcgatttcatttgatgat
ccagcatctcttgacatcaagaaccacgagcttacaacagatgagataaaaaatctctgc
gaggatttatttttattggataaaaatggtttcaagcatatcttgaaatggcggattcgc
ttacggagagcactgtcatcatcttcacaagtcaccccaaagactgatgatgctgcagag
aacacaaagatcaacgatgatggccaacttctacaggaaatggaagaattgaccagtgtc
attgatagaaagaaaaagagagagaaaaaacgtcagtcaaagcgtcgagcaaaggataaa
gcgcgcaaggcaacaggaatgcagatagatgctacaggagacaactatggagatcctgac
ttattttctattagtgctatcaagggtggaaaagaacttcaagctgttgaatcagcagag
cttaatgtggaagatggcattggagacagtgaggatgagggaattcaagctcctgaagac
tctgatgaggaaatggactctgatgaagaacaacagaggtatgatgcccagctcgaggag
atgcttgatgaagcttatgagcgctttgtaacgaaaaagggcggggaagtaaaacaagaa
cgtaagcgtgcaaagcgaatcaatcctgacgctgatgcagacttgttagagggaggtgaa
gatgatggtgacgattttgaaatggatcaaggttttgacgaagatcaagatcaagagaca
aatccccttttattatctctagatgaacagaagccaactaaagagcagattatagagcag
tggtacagtcaggatgtgttcacagaagcaggaacaggcgttgctgagcagagtgatagt
gaagatgaaagagagaagttgcagaggaattcgaaaaagatagatactggtaaaaaggaa
aaactggttagagcacagcgtttgaaacaagatgattttgagattgtaccagcagaacca
gttagaactgaagatgactcatcttcatcttctgatgagtcagatgaaccagaggaggat
ctcgatgatgtatcgaaggctgaagtactagcctatgcaaagaagatgctgaggaagaag
cagagagagcagatacttgatgatgcttacaacaggtacgtgtttgatgatgaaggtcta
cctacatggtttcttgaggatgaaaagaggcatagacagcctatgaagcctgttacacgt
gaggaagtagccgccatgaaggctatgtttaaggagattgatgcccgtccagccaaaaag
gttgcagaggccaaggctcggaagaagcgagttgccatgaggcaattggacaaggcacgc
caaaaggcagatgccgtcgcagaccagaatgacataaacgagctgtcaaagaggaagatg
atcgaccgcatttacaggaaggcgatgccaaagaagcctcagaaggagtacgtcgttgca
aagaagggagttgaggtgagggctggcaaagggaaggtattggtggatccgcggatgaag
aaggacaagagggccagggggactgggaagaaagggaagaagggtggcaaaagcgccaag
gggaagggtagccagaaaggcatgagagggaaagctgggaagaagaccgggaaatccccg
aggtaa
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