Phragmites australis (common reed): 133884879
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Entry
133884879 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133884879
KO
K11793
cereblon
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133884879
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133884879
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GFIT
Motif
Pfam:
LON_substr_bdg
Yippee-Mis18
Znf_XAF1_N
Motif
Other DBs
NCBI-GeneID:
133884879
NCBI-ProteinID:
XP_062180442
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Position
11:30678772..30683482
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AA seq
564 aa
AA seq
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MADWNGIPARERRLMEEILQLDAEELNVEVVDDDDEEDEEGGDDDEDDSVEAFLRDNDGD
AVASTSRPFTFNTSLASLHTYLGEVDDTRGRVSLLDGGAILNLPIFYLQGVVLFPGATLP
LRVIQSRLVVAIDKALKQVDAPCTIGVVLMYRHPNHRHYTTASVGTTAEIRQLGRLDDGS
LNVVARGQQRFRLRRHWIDVDRVVWGEVQIIEEDTPLRTPRDAFAQLAACNSFKPHTCSP
IISLDMSPIKQQDHMDSEPECDTPSPQSNTSNHSSMDTRMCHLGSLSSDSIKSSDEDGDF
MHEQFWRRKLKHVKGSGTSGQSDKNTNMGNEDGLDLTSLESLPTARTRDTKLRRQYQAAG
YSKQAFQAPLSFWPRWAYEMYDSYTLARRAADLWRQIIANPTMDDHVRKPDILSFHIGSK
LPVSEFVRQKLLEIDGISYRLQKEIQLLKAFNLIKCRNCQSLIAKRSDMVVMSTDGPLGA
YVNPYGCVHETITVSNATGLALVGNPSKVHSWFPGYSWTIASCSACESHIGWLFKATKKN
LRPKSFWGIRSSQIADDAQVDQNE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggactggaacgggatcccggcgcgggagcggcgactgatggaggagatcctgcag
ctcgacgcggaggagctgaacgtcgaggtggtcgacgacgatgacgaggaggatgaggag
ggcggcgacgacgacgaggacgactccgtcgaagccttcctcagagataacgatggggat
gcagttgctagcacctcccgacctttcacattcaatacatctctagcctcactgcacacc
tatcttggtgaggttgatgatacacggggtagagtttcactcttggatggtggtgcaatc
ctgaacttaccaattttctatcttcaaggtgttgttctgtttccaggagctacccttcct
ctgagagtaattcagtctagattagtagttgctattgacaaagctttgaaacaggtcgac
gctccatgcacaattggtgtggttctcatgtatcgacacccaaatcatcgacattatact
accgcttcggttggaacaacagcagagatacgtcaacttggaaggttggatgatggttca
ttaaatgttgttgcccgtggtcagcaacgatttcgtctgaggaggcattggattgatgtt
gatcgggtggtatggggtgaagtccaaatcattgaagaggatactcctttgagaactcca
agggatgcatttgcacagctagctgcatgtaatagcttcaagccacacacttgttcaccc
attatcagtttggatatgtctccaatcaaacaacaggatcatatggattcagaaccagaa
tgtgatactccatcacctcaaagtaatacaagcaatcattcatcaatggatacaaggatg
tgccatctaggttcactgtcaagtgactcgattaaatcctcagatgaagatggagatttc
atgcacgagcagttttggagacggaagttaaaacatgtgaagggaagtggcacatcaggt
cagtcagacaaaaataccaacatgggcaatgaggatggtcttgacttgacatctcttgaa
tccttgccaacagcaagaacaagagatactaagttgcggcggcagtaccaggctgctggt
tactcaaagcaggcttttcaggcaccattatcattttggcctcggtgggcttatgaaatg
tatgactcatatacacttgctcgtagggctgcagatttatggagacagataattgcaaac
ccaaccatggatgatcatgtaagaaagccagacattttgtcatttcacattggaagcaaa
cttcctgtctcagaatttgtgagacaaaaactgctggagattgatggaatttcgtatcgc
ctacagaaggaaattcaacttcttaaggcctttaatcttattaaatgcagaaactgccag
tctcttatagcaaaacgcagtgacatggtggtgatgtctactgatgggcctctcggtgcc
tatgtcaacccttatggttgtgtccatgagacgataacagtcagcaatgcaactgggctc
gctctcgttggcaatccttcaaaggttcacagctggtttccagggtactcgtggacgatt
gcatcatgctcggcctgcgagtcccacataggctggctattcaaagccacgaagaaaaat
ctgcgaccgaaatccttttgggggatccgcagctcacagatcgcagatgatgcacaggta
gatcagaacgagtga
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